Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV2A0A0B4J234 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAV2A0A0B4J234 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV2A0A0B4J234 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV2A0A0B4J234 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAV2A0A0B4J234 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV2A0A0B4J234 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV2A0A0B4J234 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV2A0A0B4J234 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV2A0A0B4J234 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAV2A0A0B4J234 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TRAV2A0A0B4J234 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAV2A0A0B4J234 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV2A0A0B4J234 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV2A0A0B4J234 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV2A0A0B4J234 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV2A0A0B4J234 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV2A0A0B4J234 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV2A0A0B4J234 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.07■□□□□ 0.32
TRAV2A0A0B4J234 AC005703.6-201ENST00000623265 1329 ntBASIC17.07■□□□□ 0.32
TRAV2A0A0B4J234 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV2A0A0B4J234 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV2A0A0B4J234 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.07■□□□□ 0.32
TRAV2A0A0B4J234 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV2A0A0B4J234 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV2A0A0B4J234 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV2A0A0B4J234 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV2A0A0B4J234 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV2A0A0B4J234 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TRAV2A0A0B4J234 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV2A0A0B4J234 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV2A0A0B4J234 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV2A0A0B4J234 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAV2A0A0B4J234 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV2A0A0B4J234 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV2A0A0B4J234 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRAV2A0A0B4J234 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV2A0A0B4J234 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRAV2A0A0B4J234 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV2A0A0B4J234 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV2A0A0B4J234 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV2A0A0B4J234 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
TRAV2A0A0B4J234 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
TRAV2A0A0B4J234 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV2A0A0B4J234 AC010997.5-201ENST00000609182 354 ntBASIC17.05■□□□□ 0.32
TRAV2A0A0B4J234 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRAV2A0A0B4J234 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV2A0A0B4J234 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV2A0A0B4J234 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV2A0A0B4J234 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV2A0A0B4J234 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV2A0A0B4J234 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV2A0A0B4J234 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRAV2A0A0B4J234 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV2A0A0B4J234 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV2A0A0B4J234 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV2A0A0B4J234 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TRAV2A0A0B4J234 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV2A0A0B4J234 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV2A0A0B4J234 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV2A0A0B4J234 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV2A0A0B4J234 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV2A0A0B4J234 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV2A0A0B4J234 GUSBP5-201ENST00000418136 578 ntBASIC17.03■□□□□ 0.32
TRAV2A0A0B4J234 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV2A0A0B4J234 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV2A0A0B4J234 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV2A0A0B4J234 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV2A0A0B4J234 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV2A0A0B4J234 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV2A0A0B4J234 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV2A0A0B4J234 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV2A0A0B4J234 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV2A0A0B4J234 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV2A0A0B4J234 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRAV2A0A0B4J234 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV2A0A0B4J234 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV2A0A0B4J234 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV2A0A0B4J234 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV2A0A0B4J234 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV2A0A0B4J234 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRAV2A0A0B4J234 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV2A0A0B4J234 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.02■□□□□ 0.31
TRAV2A0A0B4J234 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV2A0A0B4J234 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms