Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DUX4Q9UBX2 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 AC131902.2-201ENST00000566892 2172 ntBASIC12.91□□□□□ -0.34
DUX4Q9UBX2 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 AC104596.2-201ENST00000512793 793 ntBASIC12.91□□□□□ -0.34
DUX4Q9UBX2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 AC092552.1-201ENST00000547243 906 ntBASIC12.91□□□□□ -0.34
DUX4Q9UBX2 AL359711.2-201ENST00000563105 872 ntBASIC12.91□□□□□ -0.34
DUX4Q9UBX2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 BRI3BPP1-201ENST00000594224 787 ntBASIC12.91□□□□□ -0.34
DUX4Q9UBX2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 AC107373.2-201ENST00000607735 490 ntBASIC12.91□□□□□ -0.34
DUX4Q9UBX2 WFDC1-204ENST00000613603 549 ntBASIC12.91□□□□□ -0.34
DUX4Q9UBX2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 AC025048.6-201ENST00000634326 1161 ntBASIC12.91□□□□□ -0.34
DUX4Q9UBX2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 ALK-205ENST00000618119 4646 ntTSL 5 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 Z82170.1-201ENST00000625081 3192 ntBASIC12.91□□□□□ -0.34
DUX4Q9UBX2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.91□□□□□ -0.34
DUX4Q9UBX2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 DRD5P1-201ENST00000456605 1438 ntBASIC12.9□□□□□ -0.34
DUX4Q9UBX2 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 INTS4P2-202ENST00000614726 2019 ntBASIC12.9□□□□□ -0.34
DUX4Q9UBX2 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.9□□□□□ -0.34
DUX4Q9UBX2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.9□□□□□ -0.34
DUX4Q9UBX2 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms