Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC104989.1-201ENST00000519711 778 ntBASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 AC023310.3-201ENST00000557027 670 ntBASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 AC100756.1-201ENST00000562736 682 ntBASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 DUX4L47-201ENST00000566374 394 ntBASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 AC138749.3-201ENST00000567691 622 ntBASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 AC116165.1-201ENST00000611806 668 ntBASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 AC004461.2-201ENST00000629517 803 ntBASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 ACTBP11-201ENST00000436287 1126 ntBASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 MIR6787-201ENST00000616675 61 ntBASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 AL136172.1-201ENST00000598590 1394 ntBASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCM2LQ9NUG4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CCM2LQ9NUG4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CCM2LQ9NUG4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CCM2LQ9NUG4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.9□□□□□ -0.19
CCM2LQ9NUG4 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
CCM2LQ9NUG4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CCM2LQ9NUG4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
CCM2LQ9NUG4 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms