Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 AC015909.5-201ENST00000624336 2266 ntBASIC15.4■□□□□ 0.06
CD248Q9HCU0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.4■□□□□ 0.06
CD248Q9HCU0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 AKR7A2P1-201ENST00000460134 915 ntBASIC15.4■□□□□ 0.06
CD248Q9HCU0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 AC130686.1-201ENST00000622936 2466 ntBASIC15.4■□□□□ 0.06
CD248Q9HCU0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.4■□□□□ 0.06
CD248Q9HCU0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD248Q9HCU0 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 AL354989.2-201ENST00000435838 1540 ntBASIC15.39■□□□□ 0.05
CD248Q9HCU0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 SAMD11P1-201ENST00000571429 661 ntBASIC15.39■□□□□ 0.05
CD248Q9HCU0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CD248Q9HCU0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms