Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 AC009884.2-201ENST00000603110 324 ntBASIC13.89□□□□□ -0.19
BRF2Q9HAW0 AC021016.3-201ENST00000608367 477 ntBASIC13.89□□□□□ -0.19
BRF2Q9HAW0 AC244157.2-201ENST00000616239 1006 ntBASIC13.89□□□□□ -0.19
BRF2Q9HAW0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 AC244394.1-201ENST00000435000 1665 ntBASIC13.88□□□□□ -0.19
BRF2Q9HAW0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 LAP3P2-201ENST00000454686 1454 ntBASIC13.88□□□□□ -0.19
BRF2Q9HAW0 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 AL157996.1-201ENST00000624684 2299 ntBASIC13.88□□□□□ -0.19
BRF2Q9HAW0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 AC023794.5-201ENST00000564380 2157 ntBASIC13.88□□□□□ -0.19
BRF2Q9HAW0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 RAB43P1-201ENST00000561790 589 ntBASIC13.88□□□□□ -0.19
BRF2Q9HAW0 AL512343.1-201ENST00000605837 169 ntBASIC13.88□□□□□ -0.19
BRF2Q9HAW0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BRF2Q9HAW0 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BRF2Q9HAW0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms