Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 AC009486.1-201ENST00000569860 813 ntBASIC12.75□□□□□ -0.37
CPNE2Q96FN4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 REXO1L1P-201ENST00000379010 6598 ntBASIC12.74□□□□□ -0.37
CPNE2Q96FN4 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 AC123567.1-201ENST00000548294 1261 ntBASIC12.74□□□□□ -0.37
CPNE2Q96FN4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 TMEM261P1-201ENST00000604899 340 ntBASIC12.74□□□□□ -0.37
CPNE2Q96FN4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CPNE2Q96FN4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 AC015688.4-201ENST00000580780 1647 ntBASIC12.73□□□□□ -0.37
CPNE2Q96FN4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 AC020910.6-201ENST00000623084 1459 ntBASIC12.73□□□□□ -0.37
CPNE2Q96FN4 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 AC016397.2-201ENST00000624848 1985 ntBASIC12.73□□□□□ -0.37
CPNE2Q96FN4 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.73□□□□□ -0.37
CPNE2Q96FN4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms