Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 SHMT1P1-201ENST00000419974 1312 ntBASIC17.55■□□□□ 0.4
TTC41PQ6P2S7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC41PQ6P2S7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC41PQ6P2S7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC41PQ6P2S7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TTC41PQ6P2S7 BEND3P1-201ENST00000421591 1944 ntBASIC17.55■□□□□ 0.4
TTC41PQ6P2S7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC41PQ6P2S7 NFIC-211ENST00000641145 8399 ntBASIC17.55■□□□□ 0.4
TTC41PQ6P2S7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 RCC2P8-201ENST00000502779 1035 ntBASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC41PQ6P2S7 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 AC103592.1-201ENST00000394513 664 ntBASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.53■□□□□ 0.4
TTC41PQ6P2S7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 TSPY25P-201ENST00000429463 745 ntBASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 AC007274.1-201ENST00000439805 662 ntBASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 ZNF767P-206ENST00000513792 565 ntBASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 MIR4538-201ENST00000581377 78 ntBASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.52■□□□□ 0.4
TTC41PQ6P2S7 MIR3188-201ENST00000583494 85 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms