Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC18.7■□□□□ 0.58
COL16A1Q07092 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 MIR4459-201ENST00000581837 66 ntBASIC18.7■□□□□ 0.58
COL16A1Q07092 AC090616.6-202ENST00000583601 1088 ntBASIC18.7■□□□□ 0.58
COL16A1Q07092 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC18.7■□□□□ 0.58
COL16A1Q07092 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
COL16A1Q07092 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC18.7■□□□□ 0.58
COL16A1Q07092 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.7■□□□□ 0.58
COL16A1Q07092 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
COL16A1Q07092 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
COL16A1Q07092 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.7■□□□□ 0.58
COL16A1Q07092 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
COL16A1Q07092 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COL16A1Q07092 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC18.69■□□□□ 0.58
COL16A1Q07092 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 DDC-204ENST00000426377 1700 ntTSL 3 BASIC18.69■□□□□ 0.58
COL16A1Q07092 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.69■□□□□ 0.58
COL16A1Q07092 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 AP001331.1-201ENST00000413008 1015 ntBASIC18.69■□□□□ 0.58
COL16A1Q07092 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC18.69■□□□□ 0.58
COL16A1Q07092 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC18.69■□□□□ 0.58
COL16A1Q07092 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COL16A1Q07092 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
COL16A1Q07092 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.69■□□□□ 0.58
COL16A1Q07092 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL16A1Q07092 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.68■□□□□ 0.58
COL16A1Q07092 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
COL16A1Q07092 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL16A1Q07092 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL16A1Q07092 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL16A1Q07092 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC18.68■□□□□ 0.58
COL16A1Q07092 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL16A1Q07092 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC18.68■□□□□ 0.58
COL16A1Q07092 NOS2P3-201ENST00000411468 867 ntBASIC18.68■□□□□ 0.58
COL16A1Q07092 SDCBP2P1-201ENST00000416115 614 ntBASIC18.68■□□□□ 0.58
COL16A1Q07092 NOS2P2-201ENST00000426269 867 ntBASIC18.68■□□□□ 0.58
COL16A1Q07092 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC18.68■□□□□ 0.58
COL16A1Q07092 YBX1P3-201ENST00000468366 909 ntBASIC18.68■□□□□ 0.58
COL16A1Q07092 AC104212.2-201ENST00000478813 628 ntBASIC18.68■□□□□ 0.58
COL16A1Q07092 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC18.68■□□□□ 0.58
COL16A1Q07092 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC18.68■□□□□ 0.58
COL16A1Q07092 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL16A1Q07092 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC18.68■□□□□ 0.58
COL16A1Q07092 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL16A1Q07092 AC136475.7-201ENST00000602949 592 ntBASIC18.68■□□□□ 0.58
COL16A1Q07092 AC002350.2-201ENST00000623894 1828 ntBASIC18.68■□□□□ 0.58
COL16A1Q07092 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL16A1Q07092 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
COL16A1Q07092 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL16A1Q07092 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.68■□□□□ 0.58
COL16A1Q07092 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC18.68■□□□□ 0.58
COL16A1Q07092 KRT8P25-201ENST00000473150 1456 ntBASIC18.68■□□□□ 0.58
COL16A1Q07092 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COL16A1Q07092 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.68■□□□□ 0.58
COL16A1Q07092 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
COL16A1Q07092 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL16A1Q07092 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.68■□□□□ 0.58
COL16A1Q07092 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL16A1Q07092 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL16A1Q07092 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
COL16A1Q07092 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL16A1Q07092 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL16A1Q07092 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.68■□□□□ 0.58
COL16A1Q07092 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.68■□□□□ 0.58
COL16A1Q07092 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL16A1Q07092 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL16A1Q07092 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
COL16A1Q07092 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL16A1Q07092 SOD1-202ENST00000389995 865 ntTSL 3 BASIC18.67■□□□□ 0.58
COL16A1Q07092 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC18.67■□□□□ 0.58
COL16A1Q07092 POLR3DP1-201ENST00000398689 1176 ntBASIC18.67■□□□□ 0.58
COL16A1Q07092 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL16A1Q07092 SERPINB8P1-201ENST00000401898 377 ntBASIC18.67■□□□□ 0.58
COL16A1Q07092 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC18.67■□□□□ 0.58
COL16A1Q07092 TUBB8P9-201ENST00000422534 1276 ntBASIC18.67■□□□□ 0.58
COL16A1Q07092 FTLP3-201ENST00000427242 528 ntBASIC18.67■□□□□ 0.58
COL16A1Q07092 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC18.67■□□□□ 0.58
COL16A1Q07092 ASLP1-201ENST00000428790 637 ntBASIC18.67■□□□□ 0.58
COL16A1Q07092 TUBB8P10-201ENST00000430210 1279 ntBASIC18.67■□□□□ 0.58
COL16A1Q07092 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL16A1Q07092 AC012513.2-201ENST00000441511 1137 ntBASIC18.67■□□□□ 0.58
COL16A1Q07092 RN7SL477P-201ENST00000488440 286 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms