Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.79□□□□□ -0.2
CLK1P49759 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CLK1P49759 AP006294.1-201ENST00000415407 339 ntBASIC13.79□□□□□ -0.2
CLK1P49759 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.79□□□□□ -0.2
CLK1P49759 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.79□□□□□ -0.2
CLK1P49759 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.79□□□□□ -0.2
CLK1P49759 AC011495.1-201ENST00000498085 584 ntBASIC13.79□□□□□ -0.2
CLK1P49759 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.79□□□□□ -0.2
CLK1P49759 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.79□□□□□ -0.2
CLK1P49759 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CLK1P49759 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.79□□□□□ -0.2
CLK1P49759 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CLK1P49759 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CLK1P49759 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 AP005019.2-201ENST00000615104 511 ntBASIC13.79□□□□□ -0.2
CLK1P49759 AL033527.5-201ENST00000641382 801 ntBASIC13.79□□□□□ -0.2
CLK1P49759 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.79□□□□□ -0.2
CLK1P49759 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CLK1P49759 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CLK1P49759 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CLK1P49759 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLK1P49759 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.79□□□□□ -0.2
CLK1P49759 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CLK1P49759 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 AL158070.2-201ENST00000623713 1621 ntBASIC13.79□□□□□ -0.2
CLK1P49759 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.78□□□□□ -0.2
CLK1P49759 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.78□□□□□ -0.2
CLK1P49759 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLK1P49759 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.78□□□□□ -0.2
CLK1P49759 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLK1P49759 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.78□□□□□ -0.2
CLK1P49759 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLK1P49759 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.78□□□□□ -0.2
CLK1P49759 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.78□□□□□ -0.2
CLK1P49759 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.78□□□□□ -0.2
CLK1P49759 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.78□□□□□ -0.2
CLK1P49759 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.78□□□□□ -0.2
CLK1P49759 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.78□□□□□ -0.2
CLK1P49759 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.78□□□□□ -0.2
CLK1P49759 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.78□□□□□ -0.2
CLK1P49759 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.78□□□□□ -0.2
CLK1P49759 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLK1P49759 WFDC1-204ENST00000613603 549 ntBASIC13.78□□□□□ -0.2
CLK1P49759 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CLK1P49759 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CLK1P49759 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CLK1P49759 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLK1P49759 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
CLK1P49759 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.78□□□□□ -0.2
CLK1P49759 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLK1P49759 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.78□□□□□ -0.2
CLK1P49759 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.78□□□□□ -0.2
CLK1P49759 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms