Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.97□□□□□ -0.17
SLC6A12P48065 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 CCT8L1P-201ENST00000465400 1674 ntBASIC13.97□□□□□ -0.17
SLC6A12P48065 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SLC6A12P48065 FAM90A7P-201ENST00000382628 1395 ntBASIC13.96□□□□□ -0.17
SLC6A12P48065 FAM90A23P-201ENST00000400136 1395 ntBASIC13.96□□□□□ -0.17
SLC6A12P48065 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC6A12P48065 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SLC6A12P48065 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 AHCYP4-201ENST00000419201 1315 ntBASIC13.96□□□□□ -0.17
SLC6A12P48065 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC6A12P48065 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC6A12P48065 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC6A12P48065 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC6A12P48065 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC6A12P48065 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SLC6A12P48065 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.96□□□□□ -0.17
SLC6A12P48065 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC6A12P48065 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SLC6A12P48065 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC6A12P48065 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.96□□□□□ -0.17
SLC6A12P48065 ATP5G2P4-201ENST00000442175 420 ntBASIC13.96□□□□□ -0.17
SLC6A12P48065 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 HLA-J-204ENST00000495278 958 ntBASIC13.96□□□□□ -0.17
SLC6A12P48065 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.96□□□□□ -0.17
SLC6A12P48065 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.96□□□□□ -0.17
SLC6A12P48065 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC6A12P48065 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC6A12P48065 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.96□□□□□ -0.17
SLC6A12P48065 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC6A12P48065 AL583810.1-201ENST00000553344 1045 ntBASIC13.96□□□□□ -0.17
SLC6A12P48065 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.96□□□□□ -0.17
SLC6A12P48065 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 BNIP3P13-201ENST00000599968 566 ntBASIC13.96□□□□□ -0.17
SLC6A12P48065 AL023803.2-201ENST00000620080 638 ntBASIC13.96□□□□□ -0.17
SLC6A12P48065 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.96□□□□□ -0.17
SLC6A12P48065 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC6A12P48065 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC6A12P48065 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
SLC6A12P48065 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC6A12P48065 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC6A12P48065 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC6A12P48065 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
SLC6A12P48065 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.96□□□□□ -0.18
SLC6A12P48065 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC6A12P48065 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC6A12P48065 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC6A12P48065 AC111170.3-201ENST00000624282 2464 ntBASIC13.96□□□□□ -0.18
SLC6A12P48065 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC6A12P48065 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC6A12P48065 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC6A12P48065 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC6A12P48065 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SLC6A12P48065 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SLC6A12P48065 BTBD6P1-201ENST00000412176 1267 ntBASIC13.95□□□□□ -0.18
SLC6A12P48065 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC6A12P48065 XBP1P1-201ENST00000436573 652 ntBASIC13.95□□□□□ -0.18
SLC6A12P48065 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms