Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
OPN1SWP03999 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
OPN1SWP03999 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.64□□□□□ -0.23
OPN1SWP03999 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.64□□□□□ -0.23
OPN1SWP03999 AC009486.1-201ENST00000569860 813 ntBASIC13.64□□□□□ -0.23
OPN1SWP03999 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.64□□□□□ -0.23
OPN1SWP03999 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
OPN1SWP03999 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.64□□□□□ -0.23
OPN1SWP03999 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.64□□□□□ -0.23
OPN1SWP03999 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
OPN1SWP03999 ENPP7P14-201ENST00000621765 1040 ntBASIC13.64□□□□□ -0.23
OPN1SWP03999 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
OPN1SWP03999 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
OPN1SWP03999 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
OPN1SWP03999 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.64□□□□□ -0.23
OPN1SWP03999 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
OPN1SWP03999 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.64□□□□□ -0.23
OPN1SWP03999 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.64□□□□□ -0.23
OPN1SWP03999 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
OPN1SWP03999 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.64□□□□□ -0.23
OPN1SWP03999 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
OPN1SWP03999 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
OPN1SWP03999 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
OPN1SWP03999 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.64□□□□□ -0.23
OPN1SWP03999 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
OPN1SWP03999 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.63□□□□□ -0.23
OPN1SWP03999 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.63□□□□□ -0.23
OPN1SWP03999 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
OPN1SWP03999 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
OPN1SWP03999 AC072061.1-201ENST00000569710 2234 ntBASIC13.63□□□□□ -0.23
OPN1SWP03999 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.63□□□□□ -0.23
OPN1SWP03999 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 AC099521.3-201ENST00000624251 2938 ntBASIC13.63□□□□□ -0.23
OPN1SWP03999 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
OPN1SWP03999 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.63□□□□□ -0.23
OPN1SWP03999 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.63□□□□□ -0.23
OPN1SWP03999 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.63□□□□□ -0.23
OPN1SWP03999 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.63□□□□□ -0.23
OPN1SWP03999 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.63□□□□□ -0.23
OPN1SWP03999 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
OPN1SWP03999 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.63□□□□□ -0.23
OPN1SWP03999 AC015909.5-201ENST00000624336 2266 ntBASIC13.63□□□□□ -0.23
OPN1SWP03999 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.63□□□□□ -0.23
OPN1SWP03999 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
OPN1SWP03999 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
OPN1SWP03999 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
OPN1SWP03999 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.63□□□□□ -0.23
OPN1SWP03999 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
OPN1SWP03999 TUBB8P4-201ENST00000511806 1324 ntBASIC13.63□□□□□ -0.23
OPN1SWP03999 AC134312.5-201ENST00000568031 1313 ntBASIC13.63□□□□□ -0.23
OPN1SWP03999 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
OPN1SWP03999 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.62□□□□□ -0.23
OPN1SWP03999 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.62□□□□□ -0.23
OPN1SWP03999 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
OPN1SWP03999 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.62□□□□□ -0.23
OPN1SWP03999 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
OPN1SWP03999 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
OPN1SWP03999 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
OPN1SWP03999 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms