Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 IFNWP2-201ENST00000431203 580 ntBASIC15.38■□□□□ 0.05
TIMP1P01033 KRT8P30-201ENST00000432100 650 ntBASIC15.38■□□□□ 0.05
TIMP1P01033 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC15.38■□□□□ 0.05
TIMP1P01033 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.38■□□□□ 0.05
TIMP1P01033 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC15.38■□□□□ 0.05
TIMP1P01033 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC15.38■□□□□ 0.05
TIMP1P01033 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC15.38■□□□□ 0.05
TIMP1P01033 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC15.38■□□□□ 0.05
TIMP1P01033 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC15.38■□□□□ 0.05
TIMP1P01033 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC15.38■□□□□ 0.05
TIMP1P01033 MT3-202ENST00000561640 514 ntTSL 3 BASIC15.38■□□□□ 0.05
TIMP1P01033 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TIMP1P01033 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC15.38■□□□□ 0.05
TIMP1P01033 GGNBP1-204ENST00000613113 887 ntBASIC15.38■□□□□ 0.05
TIMP1P01033 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC15.38■□□□□ 0.05
TIMP1P01033 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TIMP1P01033 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.38■□□□□ 0.05
TIMP1P01033 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TIMP1P01033 MYADML-201ENST00000474610 2147 ntBASIC15.38■□□□□ 0.05
TIMP1P01033 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 HYMAI-201ENST00000635591 3347 ntBASIC15.38■□□□□ 0.05
TIMP1P01033 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 AC018442.1-201ENST00000421439 2061 ntBASIC15.37■□□□□ 0.05
TIMP1P01033 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.37■□□□□ 0.05
TIMP1P01033 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC15.37■□□□□ 0.05
TIMP1P01033 AC025594.1-201ENST00000469533 543 ntBASIC15.37■□□□□ 0.05
TIMP1P01033 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC15.37■□□□□ 0.05
TIMP1P01033 MIR2278-201ENST00000516344 96 ntBASIC15.37■□□□□ 0.05
TIMP1P01033 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC15.37■□□□□ 0.05
TIMP1P01033 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.37■□□□□ 0.05
TIMP1P01033 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC15.37■□□□□ 0.05
TIMP1P01033 AL512310.5-201ENST00000551999 515 ntBASIC15.37■□□□□ 0.05
TIMP1P01033 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC15.37■□□□□ 0.05
TIMP1P01033 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC15.37■□□□□ 0.05
TIMP1P01033 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 AC007952.5-201ENST00000572818 1486 ntBASIC15.37■□□□□ 0.05
TIMP1P01033 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.37■□□□□ 0.05
TIMP1P01033 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 LINC00554-201ENST00000564841 3011 ntBASIC15.37■□□□□ 0.05
TIMP1P01033 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TIMP1P01033 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TIMP1P01033 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.37■□□□□ 0.05
TIMP1P01033 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
TIMP1P01033 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TIMP1P01033 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
TIMP1P01033 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.36■□□□□ 0.05
TIMP1P01033 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
TIMP1P01033 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TIMP1P01033 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 AC215219.1-201ENST00000400706 1817 ntBASIC15.36■□□□□ 0.05
TIMP1P01033 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TIMP1P01033 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms