Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LDB3O75112 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.69□□□□□ -0.22
LDB3O75112 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LDB3O75112 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.69□□□□□ -0.22
LDB3O75112 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LDB3O75112 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LDB3O75112 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LDB3O75112 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LDB3O75112 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.69□□□□□ -0.22
LDB3O75112 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LDB3O75112 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LDB3O75112 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LDB3O75112 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LDB3O75112 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.69□□□□□ -0.22
LDB3O75112 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LDB3O75112 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LDB3O75112 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LDB3O75112 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LDB3O75112 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.68□□□□□ -0.22
LDB3O75112 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LDB3O75112 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.68□□□□□ -0.22
LDB3O75112 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
LDB3O75112 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.68□□□□□ -0.22
LDB3O75112 CYP4F23P-201ENST00000593402 1579 ntBASIC13.68□□□□□ -0.22
LDB3O75112 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.68□□□□□ -0.22
LDB3O75112 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.68□□□□□ -0.22
LDB3O75112 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.68□□□□□ -0.22
LDB3O75112 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.68□□□□□ -0.22
LDB3O75112 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.68□□□□□ -0.22
LDB3O75112 AC006122.1-201ENST00000493323 440 ntBASIC13.68□□□□□ -0.22
LDB3O75112 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LDB3O75112 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.68□□□□□ -0.22
LDB3O75112 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.68□□□□□ -0.22
LDB3O75112 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.68□□□□□ -0.22
LDB3O75112 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
LDB3O75112 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LDB3O75112 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.68□□□□□ -0.22
LDB3O75112 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LDB3O75112 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LDB3O75112 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.68□□□□□ -0.22
LDB3O75112 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.68□□□□□ -0.22
LDB3O75112 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
LDB3O75112 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LDB3O75112 CICP16-201ENST00000502609 2813 ntBASIC13.68□□□□□ -0.22
LDB3O75112 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.67□□□□□ -0.22
LDB3O75112 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.67□□□□□ -0.22
LDB3O75112 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
LDB3O75112 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.67□□□□□ -0.22
LDB3O75112 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
LDB3O75112 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LDB3O75112 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
LDB3O75112 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.67□□□□□ -0.22
LDB3O75112 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.67□□□□□ -0.22
LDB3O75112 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LDB3O75112 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.67□□□□□ -0.22
LDB3O75112 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.67□□□□□ -0.22
LDB3O75112 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.67□□□□□ -0.22
LDB3O75112 AL161932.2-201ENST00000435436 679 ntBASIC13.67□□□□□ -0.22
LDB3O75112 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.67□□□□□ -0.22
LDB3O75112 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 SCARNA21-201ENST00000517026 139 ntBASIC13.67□□□□□ -0.22
LDB3O75112 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.67□□□□□ -0.22
LDB3O75112 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.67□□□□□ -0.22
LDB3O75112 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.67□□□□□ -0.22
LDB3O75112 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.67□□□□□ -0.22
LDB3O75112 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.67□□□□□ -0.22
LDB3O75112 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.67□□□□□ -0.22
LDB3O75112 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LDB3O75112 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
LDB3O75112 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.67□□□□□ -0.22
LDB3O75112 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms