Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.95□□□□□ -0.18
PDLIM1O00151 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.95□□□□□ -0.18
PDLIM1O00151 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.95□□□□□ -0.18
PDLIM1O00151 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.95□□□□□ -0.18
PDLIM1O00151 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.95□□□□□ -0.18
PDLIM1O00151 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM1O00151 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM1O00151 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM1O00151 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM1O00151 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM1O00151 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PDLIM1O00151 POM121L14P-201ENST00000406100 1558 ntBASIC13.95□□□□□ -0.18
PDLIM1O00151 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM1O00151 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC13.95□□□□□ -0.18
PDLIM1O00151 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM1O00151 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.95□□□□□ -0.18
PDLIM1O00151 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM1O00151 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.95□□□□□ -0.18
PDLIM1O00151 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM1O00151 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM1O00151 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM1O00151 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
PDLIM1O00151 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM1O00151 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PDLIM1O00151 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.94□□□□□ -0.18
PDLIM1O00151 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC13.94□□□□□ -0.18
PDLIM1O00151 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PDLIM1O00151 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.94□□□□□ -0.18
PDLIM1O00151 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PDLIM1O00151 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PDLIM1O00151 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC13.94□□□□□ -0.18
PDLIM1O00151 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PDLIM1O00151 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PDLIM1O00151 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.94□□□□□ -0.18
PDLIM1O00151 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PDLIM1O00151 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.94□□□□□ -0.18
PDLIM1O00151 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.94□□□□□ -0.18
PDLIM1O00151 KRT18P43-201ENST00000469825 1281 ntBASIC13.94□□□□□ -0.18
PDLIM1O00151 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PDLIM1O00151 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.94□□□□□ -0.18
PDLIM1O00151 AC104794.3-201ENST00000566840 1248 ntBASIC13.94□□□□□ -0.18
PDLIM1O00151 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.94□□□□□ -0.18
PDLIM1O00151 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.94□□□□□ -0.18
PDLIM1O00151 SRD5A3P1-201ENST00000603021 949 ntBASIC13.94□□□□□ -0.18
PDLIM1O00151 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
PDLIM1O00151 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.94□□□□□ -0.18
PDLIM1O00151 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.94□□□□□ -0.18
PDLIM1O00151 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PDLIM1O00151 AC012531.1-201ENST00000562848 2680 ntBASIC13.94□□□□□ -0.18
PDLIM1O00151 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 AC072061.1-201ENST00000569710 2234 ntBASIC13.94□□□□□ -0.18
PDLIM1O00151 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM1O00151 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.93□□□□□ -0.18
PDLIM1O00151 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PDLIM1O00151 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.93□□□□□ -0.18
PDLIM1O00151 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.93□□□□□ -0.18
PDLIM1O00151 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PDLIM1O00151 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC13.93□□□□□ -0.18
PDLIM1O00151 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
PDLIM1O00151 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.93□□□□□ -0.18
PDLIM1O00151 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 AC015922.1-201ENST00000421102 1152 ntBASIC13.93□□□□□ -0.18
PDLIM1O00151 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.93□□□□□ -0.18
PDLIM1O00151 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms