Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 AC027601.5-201ENST00000624065 2482 ntBASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGC4Q9Y5F7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 GPAA1P2-201ENST00000417923 928 ntBASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 ST13P19-201ENST00000442505 1124 ntBASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 AC013355.1-201ENST00000562625 723 ntBASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 AP000346.4-201ENST00000614827 381 ntBASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 AL136295.7-201ENST00000619226 1200 ntBASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 AC005089.1-201ENST00000619486 2241 ntBASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 AC020907.1-201ENST00000616460 1350 ntBASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGC4Q9Y5F7 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 AL365209.1-201ENST00000624418 6473 ntBASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 HSPA8P5-201ENST00000456928 2069 ntBASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 KRT8P13-201ENST00000463294 1010 ntBASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 MIR3615-201ENST00000581999 87 ntBASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 AC244093.1-201ENST00000610837 814 ntBASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGC4Q9Y5F7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms