Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 ALG1L3P-201ENST00000503331 765 ntBASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 TREHP1-201ENST00000531328 465 ntBASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 CYP4F36P-201ENST00000589193 186 ntBASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 RPS5-204ENST00000598098 536 ntTSL 2 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 AL139424.3-202ENST00000641619 917 ntBASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 TUBB4AP1-201ENST00000450755 1325 ntBASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 DDC-204ENST00000426377 1700 ntTSL 3 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 RCC2P1-201ENST00000452257 1476 ntBASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 MIR5001-201ENST00000580185 100 ntBASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
SHANK2Q9UPX8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 ABHD17AP9-201ENST00000561925 548 ntBASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHANK2Q9UPX8 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 AP005212.2-201ENST00000584979 510 ntBASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 PHB-210ENST00000511832 1509 ntTSL 2 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms