Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 AC126915.1-201ENST00000522847 1038 ntBASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 RN7SL163P-201ENST00000583100 276 ntBASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 MIR6752-201ENST00000618442 71 ntBASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 MYO15B-237ENST00000642007 4893 ntBASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 AL359881.3-201ENST00000602640 1721 ntBASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 NKAIN1P1-201ENST00000435754 582 ntBASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 ACTBP11-201ENST00000436287 1126 ntBASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 AC044849.1-201ENST00000519737 1188 ntBASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 AC009779.1-201ENST00000551138 283 ntBASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 AL591471.1-201ENST00000621855 229 ntBASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BLOC1S4Q9NUP1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 LINC02486-201ENST00000604157 3000 ntBASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 AC023794.5-201ENST00000564380 2157 ntBASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 AC063926.3-201ENST00000624734 5658 ntBASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms