Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 AC090643.2-201ENST00000623442 2029 ntBASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 AL118506.1-201ENST00000601296 3082 ntBASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 AL512361.1-201ENST00000554200 418 ntBASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 AC051619.7-201ENST00000568314 623 ntBASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 AP001059.3-201ENST00000619053 235 ntBASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 AC215219.1-201ENST00000400706 1817 ntBASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 AC118758.2-201ENST00000614242 2813 ntBASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 AR-208ENST00000612452 10676 ntTSL 5 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
SND1-IT1Q9HBX3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms