Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RFWD2Q8NHY2 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
RFWD2Q8NHY2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.46□□□□□ -0.1
RFWD2Q8NHY2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
RFWD2Q8NHY2 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RFWD2Q8NHY2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.46□□□□□ -0.1
RFWD2Q8NHY2 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 TUBB8P4-201ENST00000511806 1324 ntBASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 AC092183.1-201ENST00000469884 875 ntBASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 AL391069.4-201ENST00000609583 481 ntBASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 AL390754.1-201ENST00000619088 582 ntBASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFWD2Q8NHY2 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 AC092580.3-201ENST00000430932 139 ntBASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 AC026410.3-201ENST00000514280 936 ntBASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 TIMM17BP1-201ENST00000545713 516 ntBASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 PRSS30P-206ENST00000641773 873 ntBASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RFWD2Q8NHY2 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms