Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 COX5BP8-201ENST00000416911 349 ntBASIC13.48□□□□□ -0.25
VRK2Q86Y07 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.48□□□□□ -0.25
VRK2Q86Y07 AC027601.3-201ENST00000622907 509 ntBASIC13.48□□□□□ -0.25
VRK2Q86Y07 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.48□□□□□ -0.25
VRK2Q86Y07 PTENP1-202ENST00000532280 3996 ntBASIC13.48□□□□□ -0.25
VRK2Q86Y07 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 AC111170.3-201ENST00000624282 2464 ntBASIC13.48□□□□□ -0.25
VRK2Q86Y07 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 TUBB8P4-201ENST00000511806 1324 ntBASIC13.47□□□□□ -0.25
VRK2Q86Y07 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 AC006001.1-201ENST00000325130 474 ntBASIC13.47□□□□□ -0.25
VRK2Q86Y07 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 AL136309.1-201ENST00000403917 691 ntBASIC13.47□□□□□ -0.25
VRK2Q86Y07 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 AL161932.2-201ENST00000435436 679 ntBASIC13.47□□□□□ -0.25
VRK2Q86Y07 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 TMEM198B-204ENST00000484016 896 ntBASIC13.47□□□□□ -0.25
VRK2Q86Y07 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 AC005586.2-201ENST00000563946 837 ntBASIC13.47□□□□□ -0.25
VRK2Q86Y07 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 AL358472.5-202ENST00000641448 1267 ntBASIC13.47□□□□□ -0.25
VRK2Q86Y07 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms