Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 BOLA2P3-201ENST00000404566 256 ntBASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 CTBP2P5-201ENST00000454986 1264 ntBASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 AC036164.1-201ENST00000570544 333 ntBASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 LINC01115-203ENST00000606068 577 ntBASIC15.27■□□□□ 0.04
FOXR1Q6PIV2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.03
FOXR1Q6PIV2 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC15.27■□□□□ 0.03
FOXR1Q6PIV2 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
FOXR1Q6PIV2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FOXR1Q6PIV2 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FOXR1Q6PIV2 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
FOXR1Q6PIV2 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC15.27■□□□□ 0.03
FOXR1Q6PIV2 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
FOXR1Q6PIV2 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FOXR1Q6PIV2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.27■□□□□ 0.03
FOXR1Q6PIV2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
FOXR1Q6PIV2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 AP000437.1-201ENST00000624057 2085 ntBASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 ANKRD19P-201ENST00000338192 862 ntBASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 FO393414.2-201ENST00000405153 598 ntBASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 RN7SL399P-201ENST00000471648 279 ntBASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 TDH-203ENST00000531764 1110 ntBASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 AC133539.2-201ENST00000604757 467 ntBASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 CU634019.7-201ENST00000624153 1185 ntBASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 FP236241.2-201ENST00000624906 1185 ntBASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 AC072061.1-201ENST00000569710 2234 ntBASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms