Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 AC004945.1-201ENST00000416738 983 ntBASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 AC026410.3-201ENST00000514280 936 ntBASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 API5-211ENST00000534695 560 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 AC092552.1-201ENST00000547243 906 ntBASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 AC120045.2-201ENST00000567334 178 ntBASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 AC133539.2-201ENST00000604757 467 ntBASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 AC107373.2-201ENST00000607735 490 ntBASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 AC023024.2-201ENST00000623561 1993 ntBASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 DRD5P1-201ENST00000456605 1438 ntBASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 WASH3P-207ENST00000560956 1394 ntBASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 C1QBPP1-201ENST00000400117 770 ntBASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 SOCS2P1-201ENST00000417727 557 ntBASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 SAMD11P1-201ENST00000571429 661 ntBASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 CHCHD2P3-201ENST00000603038 451 ntBASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 AC008494.3-201ENST00000606615 944 ntBASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM53Q6P2H8 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM53Q6P2H8 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms