Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CDC42BPAQ5VT25 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 MIR1307-201ENST00000408840 149 ntBASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 RPSAP6-201ENST00000417882 882 ntBASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 BCRP4-201ENST00000506079 804 ntBASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 BAK1P2-201ENST00000532665 631 ntBASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 AC020904.3-201ENST00000624199 442 ntBASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 USP39-207ENST00000450066 2086 ntTSL 2 BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDC42BPAQ5VT25 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 AC025594.1-201ENST00000469533 543 ntBASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 HNRNPA3P6-201ENST00000472163 1006 ntBASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 AC079414.2-201ENST00000567157 1104 ntBASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 AC132812.1-201ENST00000583145 892 ntBASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 AC015802.1-201ENST00000588104 1449 ntBASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPAQ5VT25 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 AC112250.1-201ENST00000504640 745 ntBASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 AC018846.1-201ENST00000568231 183 ntBASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 HNRNPA1P21-201ENST00000424115 961 ntBASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 EEF1DP5-201ENST00000431410 772 ntBASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 AC120498.7-201ENST00000562876 330 ntBASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPAQ5VT25 TUBB4AP1-201ENST00000450755 1325 ntBASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 RCC2P1-201ENST00000452257 1476 ntBASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 AC024075.2-201ENST00000598112 1473 ntBASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 FMO6P-201ENST00000236166 1620 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms