Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.06□□□□□ -0.32
SCN1BQ07699 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.06□□□□□ -0.32
SCN1BQ07699 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.06□□□□□ -0.32
SCN1BQ07699 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.06□□□□□ -0.32
SCN1BQ07699 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 AL133267.1-201ENST00000398220 340 ntBASIC13.06□□□□□ -0.32
SCN1BQ07699 MIR943-201ENST00000401286 94 ntBASIC13.06□□□□□ -0.32
SCN1BQ07699 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.06□□□□□ -0.32
SCN1BQ07699 AC067863.1-201ENST00000494933 530 ntBASIC13.06□□□□□ -0.32
SCN1BQ07699 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
SCN1BQ07699 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.06□□□□□ -0.32
SCN1BQ07699 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.06□□□□□ -0.32
SCN1BQ07699 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
SCN1BQ07699 AP001160.2-201ENST00000596071 487 ntBASIC13.06□□□□□ -0.32
SCN1BQ07699 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
SCN1BQ07699 AC090643.2-201ENST00000623442 2029 ntBASIC13.06□□□□□ -0.32
SCN1BQ07699 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.06□□□□□ -0.32
SCN1BQ07699 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.06□□□□□ -0.32
SCN1BQ07699 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SCN1BQ07699 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.06□□□□□ -0.32
SCN1BQ07699 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCN1BQ07699 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 AC072061.1-201ENST00000569710 2234 ntBASIC13.05□□□□□ -0.32
SCN1BQ07699 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 AC092053.3-201ENST00000641308 4975 ntBASIC13.05□□□□□ -0.32
SCN1BQ07699 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 KHSRPP1-201ENST00000427983 1768 ntBASIC13.05□□□□□ -0.32
SCN1BQ07699 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 AL121723.1-201ENST00000445194 1519 ntBASIC13.05□□□□□ -0.32
SCN1BQ07699 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
SCN1BQ07699 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.05□□□□□ -0.32
SCN1BQ07699 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SCN1BQ07699 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.05□□□□□ -0.32
SCN1BQ07699 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.05□□□□□ -0.32
SCN1BQ07699 KRT18P43-201ENST00000469825 1281 ntBASIC13.05□□□□□ -0.32
SCN1BQ07699 AC097493.3-201ENST00000509725 367 ntBASIC13.05□□□□□ -0.32
SCN1BQ07699 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.05□□□□□ -0.32
SCN1BQ07699 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.05□□□□□ -0.32
SCN1BQ07699 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.05□□□□□ -0.32
SCN1BQ07699 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.05□□□□□ -0.32
SCN1BQ07699 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.05□□□□□ -0.32
SCN1BQ07699 AC025181.2-201ENST00000606994 802 ntBASIC13.05□□□□□ -0.32
SCN1BQ07699 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.05□□□□□ -0.32
SCN1BQ07699 AC023511.2-201ENST00000618803 211 ntBASIC13.05□□□□□ -0.32
SCN1BQ07699 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.05□□□□□ -0.32
SCN1BQ07699 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
SCN1BQ07699 KRT18P28-201ENST00000453838 1332 ntBASIC13.05□□□□□ -0.32
SCN1BQ07699 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.05□□□□□ -0.32
SCN1BQ07699 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SCN1BQ07699 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SCN1BQ07699 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SCN1BQ07699 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms