Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
PRKDCP78527 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
PRKDCP78527 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
PRKDCP78527 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC10.02□□□□□ -0.81
PRKDCP78527 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC10.02□□□□□ -0.81
PRKDCP78527 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PRKDCP78527 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC10.02□□□□□ -0.81
PRKDCP78527 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PRKDCP78527 MESTP4-201ENST00000412333 1204 ntBASIC10.02□□□□□ -0.81
PRKDCP78527 HINT1-208ENST00000513012 583 ntTSL 4 BASIC10.02□□□□□ -0.81
PRKDCP78527 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC10.02□□□□□ -0.81
PRKDCP78527 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC10.02□□□□□ -0.81
PRKDCP78527 MIR378I-201ENST00000582688 76 ntBASIC10.02□□□□□ -0.81
PRKDCP78527 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
PRKDCP78527 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC10.02□□□□□ -0.81
PRKDCP78527 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PRKDCP78527 TUBAP-201ENST00000425085 1352 ntBASIC10.02□□□□□ -0.81
PRKDCP78527 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC10.02□□□□□ -0.81
PRKDCP78527 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC10.02□□□□□ -0.81
PRKDCP78527 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PRKDCP78527 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC10.02□□□□□ -0.81
PRKDCP78527 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
PRKDCP78527 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC10.02□□□□□ -0.81
PRKDCP78527 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
PRKDCP78527 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PRKDCP78527 SRSF9P1-201ENST00000399149 530 ntBASIC10.02□□□□□ -0.81
PRKDCP78527 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC10.02□□□□□ -0.81
PRKDCP78527 GULOP-201ENST00000454030 748 ntBASIC10.02□□□□□ -0.81
PRKDCP78527 MIR2277-201ENST00000515916 93 ntBASIC10.02□□□□□ -0.81
PRKDCP78527 AL355075.5-201ENST00000553568 890 ntBASIC10.02□□□□□ -0.81
PRKDCP78527 DNM1P50-201ENST00000565767 508 ntBASIC10.02□□□□□ -0.81
PRKDCP78527 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PRKDCP78527 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.02□□□□□ -0.81
PRKDCP78527 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
PRKDCP78527 AC015688.4-201ENST00000580780 1647 ntBASIC10.02□□□□□ -0.81
PRKDCP78527 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
PRKDCP78527 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PRKDCP78527 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PRKDCP78527 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC10.02□□□□□ -0.81
PRKDCP78527 GPI-205ENST00000586425 1799 ntTSL 5 BASIC10.02□□□□□ -0.81
PRKDCP78527 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
PRKDCP78527 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PRKDCP78527 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PRKDCP78527 RN7SL5P-201ENST00000581458 321 ntBASIC10.01□□□□□ -0.81
PRKDCP78527 AL356740.1-201ENST00000602192 1297 ntBASIC10.01□□□□□ -0.81
PRKDCP78527 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 AC007274.3-201ENST00000619838 385 ntBASIC10.01□□□□□ -0.81
PRKDCP78527 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PRKDCP78527 FAM90A27P-201ENST00000593323 1370 ntBASIC10.01□□□□□ -0.81
PRKDCP78527 FAM90A28P-202ENST00000597191 1374 ntBASIC10.01□□□□□ -0.81
PRKDCP78527 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PRKDCP78527 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
PRKDCP78527 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
PRKDCP78527 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC10.01□□□□□ -0.81
PRKDCP78527 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 AC104759.1-201ENST00000559109 939 ntBASIC10.01□□□□□ -0.81
PRKDCP78527 AC091736.1-201ENST00000609370 305 ntBASIC10.01□□□□□ -0.81
PRKDCP78527 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PRKDCP78527 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
PRKDCP78527 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PRKDCP78527 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
PRKDCP78527 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PRKDCP78527 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PRKDCP78527 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PRKDCP78527 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
PRKDCP78527 DUT-208ENST00000559540 1441 ntTSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
PRKDCP78527 FPGT-205ENST00000482102 561 ntTSL 4 BASIC10.01□□□□□ -0.81
PRKDCP78527 AC017100.1-201ENST00000565978 1169 ntBASIC10.01□□□□□ -0.81
PRKDCP78527 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC10.01□□□□□ -0.81
PRKDCP78527 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC10.01□□□□□ -0.81
PRKDCP78527 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PRKDCP78527 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PRKDCP78527 AC091951.1-201ENST00000512854 2465 ntBASIC10.01□□□□□ -0.81
PRKDCP78527 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC10.01□□□□□ -0.81
PRKDCP78527 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
PRKDCP78527 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PRKDCP78527 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
PRKDCP78527 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC10.01□□□□□ -0.81
PRKDCP78527 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC10.01□□□□□ -0.81
PRKDCP78527 RPL13AP5-201ENST00000439189 612 ntBASIC10.01□□□□□ -0.81
PRKDCP78527 AC139143.1-201ENST00000441772 1207 ntBASIC10.01□□□□□ -0.81
PRKDCP78527 RN7SL2-201ENST00000490232 300 ntBASIC10.01□□□□□ -0.81
PRKDCP78527 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC10.01□□□□□ -0.81
PRKDCP78527 AP001102.1-201ENST00000528959 409 ntBASIC10.01□□□□□ -0.81
PRKDCP78527 RN7SL4P-201ENST00000584058 295 ntBASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms