Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HMGA2P52926 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.27□□□□□ -0.29
HMGA2P52926 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.27□□□□□ -0.29
HMGA2P52926 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HMGA2P52926 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
HMGA2P52926 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGA2P52926 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
HMGA2P52926 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGA2P52926 AP002761.4-201ENST00000565433 3361 ntBASIC13.26□□□□□ -0.29
HMGA2P52926 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGA2P52926 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.26□□□□□ -0.29
HMGA2P52926 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HMGA2P52926 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.26□□□□□ -0.29
HMGA2P52926 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HMGA2P52926 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGA2P52926 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HMGA2P52926 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 ACTG1P3-201ENST00000431775 1114 ntBASIC13.26□□□□□ -0.29
HMGA2P52926 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 CICP12-201ENST00000455801 843 ntBASIC13.26□□□□□ -0.29
HMGA2P52926 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGA2P52926 AC093214.1-201ENST00000511688 1107 ntBASIC13.26□□□□□ -0.29
HMGA2P52926 RNA5SP421-201ENST00000516864 134 ntBASIC13.26□□□□□ -0.29
HMGA2P52926 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.26□□□□□ -0.29
HMGA2P52926 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.26□□□□□ -0.29
HMGA2P52926 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGA2P52926 AL355102.3-201ENST00000554299 1678 ntBASIC13.26□□□□□ -0.29
HMGA2P52926 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 AC134312.5-201ENST00000568031 1313 ntBASIC13.26□□□□□ -0.29
HMGA2P52926 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGA2P52926 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HMGA2P52926 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.26□□□□□ -0.29
HMGA2P52926 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGA2P52926 WFDC1-204ENST00000613603 549 ntBASIC13.26□□□□□ -0.29
HMGA2P52926 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGA2P52926 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.26□□□□□ -0.29
HMGA2P52926 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMGA2P52926 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGA2P52926 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HMGA2P52926 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.26□□□□□ -0.29
HMGA2P52926 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HMGA2P52926 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGA2P52926 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.25□□□□□ -0.29
HMGA2P52926 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.25□□□□□ -0.29
HMGA2P52926 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HMGA2P52926 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGA2P52926 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HMGA2P52926 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
HMGA2P52926 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMGA2P52926 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGA2P52926 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGA2P52926 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGA2P52926 AC024075.2-201ENST00000598112 1473 ntBASIC13.25□□□□□ -0.29
HMGA2P52926 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.25□□□□□ -0.29
HMGA2P52926 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGA2P52926 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGA2P52926 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
HMGA2P52926 AL365209.1-201ENST00000624418 6473 ntBASIC13.25□□□□□ -0.29
HMGA2P52926 TPM3P8-201ENST00000330554 643 ntBASIC13.25□□□□□ -0.29
HMGA2P52926 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
HMGA2P52926 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMGA2P52926 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGA2P52926 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMGA2P52926 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGA2P52926 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.25□□□□□ -0.29
HMGA2P52926 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.25□□□□□ -0.29
HMGA2P52926 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.25□□□□□ -0.29
HMGA2P52926 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.25□□□□□ -0.29
HMGA2P52926 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.25□□□□□ -0.29
HMGA2P52926 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms