Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.99□□□□□ -0.33
CTSSP25774 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSSP25774 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CTSSP25774 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSSP25774 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSSP25774 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.99□□□□□ -0.33
CTSSP25774 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
CTSSP25774 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.99□□□□□ -0.33
CTSSP25774 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSSP25774 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSSP25774 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CTSSP25774 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSSP25774 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CTSSP25774 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSSP25774 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.98□□□□□ -0.33
CTSSP25774 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSSP25774 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CTSSP25774 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.98□□□□□ -0.33
CTSSP25774 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSSP25774 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.98□□□□□ -0.33
CTSSP25774 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSSP25774 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSSP25774 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.98□□□□□ -0.33
CTSSP25774 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.98□□□□□ -0.33
CTSSP25774 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC12.98□□□□□ -0.33
CTSSP25774 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.98□□□□□ -0.33
CTSSP25774 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.98□□□□□ -0.33
CTSSP25774 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CTSSP25774 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CTSSP25774 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSSP25774 AC126755.1-201ENST00000525846 6405 ntBASIC12.98□□□□□ -0.33
CTSSP25774 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSSP25774 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.97□□□□□ -0.33
CTSSP25774 AC009093.10-201ENST00000641956 1442 ntBASIC12.97□□□□□ -0.33
CTSSP25774 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CTSSP25774 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.97□□□□□ -0.33
CTSSP25774 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CTSSP25774 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CTSSP25774 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.97□□□□□ -0.33
CTSSP25774 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.97□□□□□ -0.33
CTSSP25774 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 HINT2P1-201ENST00000419438 481 ntBASIC12.97□□□□□ -0.33
CTSSP25774 PDIA3P2-201ENST00000428073 158 ntBASIC12.97□□□□□ -0.33
CTSSP25774 AC234782.1-201ENST00000451950 919 ntBASIC12.97□□□□□ -0.33
CTSSP25774 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.97□□□□□ -0.33
CTSSP25774 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.97□□□□□ -0.33
CTSSP25774 RTN3P1-201ENST00000536295 711 ntBASIC12.97□□□□□ -0.33
CTSSP25774 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.97□□□□□ -0.33
CTSSP25774 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.97□□□□□ -0.33
CTSSP25774 AC103988.2-201ENST00000561804 725 ntBASIC12.97□□□□□ -0.33
CTSSP25774 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.97□□□□□ -0.33
CTSSP25774 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.97□□□□□ -0.33
CTSSP25774 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.97□□□□□ -0.33
CTSSP25774 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CTSSP25774 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CTSSP25774 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSSP25774 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms