Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.52□□□□□ -0.4
TNFSF4P23510 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.52□□□□□ -0.4
TNFSF4P23510 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.52□□□□□ -0.4
TNFSF4P23510 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.52□□□□□ -0.4
TNFSF4P23510 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
TNFSF4P23510 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.52□□□□□ -0.4
TNFSF4P23510 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TNFSF4P23510 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TNFSF4P23510 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.52□□□□□ -0.41
TNFSF4P23510 ACTBP11-201ENST00000436287 1126 ntBASIC12.52□□□□□ -0.41
TNFSF4P23510 GOLGA2P4-201ENST00000441462 777 ntBASIC12.52□□□□□ -0.41
TNFSF4P23510 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TNFSF4P23510 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.52□□□□□ -0.41
TNFSF4P23510 CICP12-201ENST00000455801 843 ntBASIC12.52□□□□□ -0.41
TNFSF4P23510 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.52□□□□□ -0.41
TNFSF4P23510 AC022447.6-201ENST00000515522 438 ntBASIC12.52□□□□□ -0.41
TNFSF4P23510 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
TNFSF4P23510 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
TNFSF4P23510 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.52□□□□□ -0.41
TNFSF4P23510 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.52□□□□□ -0.41
TNFSF4P23510 AC132192.2-201ENST00000596206 1147 ntBASIC12.52□□□□□ -0.41
TNFSF4P23510 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.52□□□□□ -0.41
TNFSF4P23510 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.52□□□□□ -0.41
TNFSF4P23510 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TNFSF4P23510 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 KRT8P29-201ENST00000420409 1371 ntBASIC12.52□□□□□ -0.41
TNFSF4P23510 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.52□□□□□ -0.41
TNFSF4P23510 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.52□□□□□ -0.41
TNFSF4P23510 REXO1L6P-201ENST00000603433 1515 ntBASIC12.52□□□□□ -0.41
TNFSF4P23510 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TNFSF4P23510 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.51□□□□□ -0.41
TNFSF4P23510 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TNFSF4P23510 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TNFSF4P23510 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 AC026748.1-201ENST00000624349 3251 ntBASIC12.51□□□□□ -0.41
TNFSF4P23510 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 AC139712.1-201ENST00000378256 1875 ntBASIC12.51□□□□□ -0.41
TNFSF4P23510 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.51□□□□□ -0.41
TNFSF4P23510 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.51□□□□□ -0.41
TNFSF4P23510 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.51□□□□□ -0.41
TNFSF4P23510 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
TNFSF4P23510 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TNFSF4P23510 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.51□□□□□ -0.41
TNFSF4P23510 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.51□□□□□ -0.41
TNFSF4P23510 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 MIR663B-201ENST00000408361 115 ntBASIC12.51□□□□□ -0.41
TNFSF4P23510 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.51□□□□□ -0.41
TNFSF4P23510 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.51□□□□□ -0.41
TNFSF4P23510 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.51□□□□□ -0.41
TNFSF4P23510 AC092658.1-201ENST00000505836 891 ntBASIC12.51□□□□□ -0.41
TNFSF4P23510 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.51□□□□□ -0.41
TNFSF4P23510 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
TNFSF4P23510 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.51□□□□□ -0.41
TNFSF4P23510 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.51□□□□□ -0.41
TNFSF4P23510 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.51□□□□□ -0.41
TNFSF4P23510 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.51□□□□□ -0.41
TNFSF4P23510 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.51□□□□□ -0.41
TNFSF4P23510 AC007663.3-201ENST00000609632 465 ntBASIC12.51□□□□□ -0.41
TNFSF4P23510 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.51□□□□□ -0.41
TNFSF4P23510 AL359183.1-201ENST00000623796 2132 ntBASIC12.51□□□□□ -0.41
TNFSF4P23510 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.51□□□□□ -0.41
TNFSF4P23510 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.51□□□□□ -0.41
TNFSF4P23510 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms