Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CSF1P09603 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.69□□□□□ -0.38
CSF1P09603 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CSF1P09603 AL391825.1-201ENST00000457671 1364 ntBASIC12.69□□□□□ -0.38
CSF1P09603 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CSF1P09603 KC6-207ENST00000600644 2311 ntTSL 3 BASIC12.68□□□□□ -0.38
CSF1P09603 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
CSF1P09603 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.68□□□□□ -0.38
CSF1P09603 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CSF1P09603 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CSF1P09603 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CSF1P09603 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CSF1P09603 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.68□□□□□ -0.38
CSF1P09603 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 RPL37AP1-201ENST00000412502 279 ntBASIC12.68□□□□□ -0.38
CSF1P09603 DFFBP1-201ENST00000433250 979 ntBASIC12.68□□□□□ -0.38
CSF1P09603 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.68□□□□□ -0.38
CSF1P09603 RN7SL618P-201ENST00000477850 296 ntBASIC12.68□□□□□ -0.38
CSF1P09603 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.68□□□□□ -0.38
CSF1P09603 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 AC009407.1-201ENST00000568958 598 ntBASIC12.68□□□□□ -0.38
CSF1P09603 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CSF1P09603 AC017083.2-201ENST00000608069 979 ntBASIC12.68□□□□□ -0.38
CSF1P09603 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.68□□□□□ -0.38
CSF1P09603 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CSF1P09603 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 MEX3B-202ENST00000558133 4333 ntBASIC12.68□□□□□ -0.38
CSF1P09603 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CSF1P09603 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
CSF1P09603 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.68□□□□□ -0.38
CSF1P09603 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.68□□□□□ -0.38
CSF1P09603 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 MIR497HG-202ENST00000572453 3838 ntBASIC12.68□□□□□ -0.38
CSF1P09603 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
CSF1P09603 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CSF1P09603 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSF1P09603 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CSF1P09603 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 FP325330.2-201ENST00000624219 5630 ntBASIC12.67□□□□□ -0.38
CSF1P09603 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CSF1P09603 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CSF1P09603 BTBD7P1-201ENST00000447253 1453 ntBASIC12.67□□□□□ -0.38
CSF1P09603 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CSF1P09603 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 CR383656.2-201ENST00000548656 2254 ntBASIC12.67□□□□□ -0.38
CSF1P09603 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.67□□□□□ -0.38
CSF1P09603 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
CSF1P09603 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.67□□□□□ -0.38
CSF1P09603 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms