Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CCL19-202ENST00000378800 414 ntTSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
APOBP04114 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC8.69□□□□□ -1.02
APOBP04114 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC8.69□□□□□ -1.02
APOBP04114 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC8.69□□□□□ -1.02
APOBP04114 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC8.69□□□□□ -1.02
APOBP04114 BX322562.1-201ENST00000617004 561 ntBASIC8.69□□□□□ -1.02
APOBP04114 MEP1AP1-201ENST00000636082 1097 ntBASIC8.69□□□□□ -1.02
APOBP04114 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC8.69□□□□□ -1.02
APOBP04114 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 MTHFR-210ENST00000641407 2387 ntBASIC8.69□□□□□ -1.02
APOBP04114 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC8.69□□□□□ -1.02
APOBP04114 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 FTH1P18-201ENST00000412071 549 ntBASIC8.69□□□□□ -1.02
APOBP04114 AL137244.1-201ENST00000422931 865 ntBASIC8.69□□□□□ -1.02
APOBP04114 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC8.69□□□□□ -1.02
APOBP04114 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC8.69□□□□□ -1.02
APOBP04114 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
APOBP04114 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC8.69□□□□□ -1.02
APOBP04114 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC8.69□□□□□ -1.02
APOBP04114 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC8.69□□□□□ -1.02
APOBP04114 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 RN7SL684P-201ENST00000465665 294 ntBASIC8.69□□□□□ -1.02
APOBP04114 AC103724.2-201ENST00000520355 476 ntBASIC8.69□□□□□ -1.02
APOBP04114 CETN3-205ENST00000522842 664 ntTSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC8.69□□□□□ -1.02
APOBP04114 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
APOBP04114 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
APOBP04114 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 ABCD1P4-201ENST00000399687 604 ntBASIC8.68□□□□□ -1.02
APOBP04114 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC8.68□□□□□ -1.02
APOBP04114 AP001331.1-201ENST00000413008 1015 ntBASIC8.68□□□□□ -1.02
APOBP04114 AC007881.1-201ENST00000437460 187 ntBASIC8.68□□□□□ -1.02
APOBP04114 AC022121.1-201ENST00000484584 579 ntBASIC8.68□□□□□ -1.02
APOBP04114 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC8.68□□□□□ -1.02
APOBP04114 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC8.68□□□□□ -1.02
APOBP04114 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
APOBP04114 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
APOBP04114 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 STK16-202ENST00000409260 1493 ntTSL 5 BASIC8.68□□□□□ -1.02
APOBP04114 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC8.68□□□□□ -1.02
APOBP04114 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC8.68□□□□□ -1.02
APOBP04114 RN7SL69P-201ENST00000468423 272 ntBASIC8.68□□□□□ -1.02
APOBP04114 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC8.68□□□□□ -1.02
APOBP04114 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC8.68□□□□□ -1.02
APOBP04114 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC8.68□□□□□ -1.02
APOBP04114 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 AC064850.1-201ENST00000413279 1398 ntBASIC8.68□□□□□ -1.02
APOBP04114 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
APOBP04114 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 RN7SL832P-201ENST00000607781 1756 ntBASIC8.68□□□□□ -1.02
APOBP04114 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC8.68□□□□□ -1.02
APOBP04114 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 AC018442.1-201ENST00000421439 2061 ntBASIC8.68□□□□□ -1.02
APOBP04114 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
APOBP04114 RFNG-202ENST00000429557 994 ntTSL 5 BASIC8.68□□□□□ -1.02
APOBP04114 AC005011.1-201ENST00000455206 210 ntBASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms