Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 GPX3-202ENST00000517973 612 ntTSL 3 BASIC20.53■□□□□ 0.88
POLR1AO95602 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC20.53■□□□□ 0.88
POLR1AO95602 SNORD3B-1-201ENST00000577988 758 ntBASIC20.53■□□□□ 0.88
POLR1AO95602 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC20.53■□□□□ 0.88
POLR1AO95602 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1AO95602 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POLR1AO95602 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR1AO95602 AC026748.1-201ENST00000624349 3251 ntBASIC20.52■□□□□ 0.88
POLR1AO95602 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POLR1AO95602 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
POLR1AO95602 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC20.52■□□□□ 0.88
POLR1AO95602 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POLR1AO95602 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR1AO95602 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC20.52■□□□□ 0.88
POLR1AO95602 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR1AO95602 AC117503.4-201ENST00000623229 1418 ntBASIC20.52■□□□□ 0.88
POLR1AO95602 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
POLR1AO95602 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR1AO95602 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC20.52■□□□□ 0.88
POLR1AO95602 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC20.52■□□□□ 0.88
POLR1AO95602 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
POLR1AO95602 AC064801.2-201ENST00000625052 1303 ntBASIC20.52■□□□□ 0.88
POLR1AO95602 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POLR1AO95602 CDCA4P4-201ENST00000435216 680 ntBASIC20.52■□□□□ 0.88
POLR1AO95602 SEPHS2P1-201ENST00000511618 1162 ntBASIC20.52■□□□□ 0.88
POLR1AO95602 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC20.52■□□□□ 0.88
POLR1AO95602 AC087203.1-201ENST00000532111 1181 ntBASIC20.52■□□□□ 0.88
POLR1AO95602 SORD2P-201ENST00000558556 1069 ntBASIC20.52■□□□□ 0.88
POLR1AO95602 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC20.52■□□□□ 0.88
POLR1AO95602 ANKRD26P1-203ENST00000569528 966 ntBASIC20.52■□□□□ 0.88
POLR1AO95602 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC20.52■□□□□ 0.88
POLR1AO95602 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC20.52■□□□□ 0.88
POLR1AO95602 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POLR1AO95602 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR1AO95602 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
POLR1AO95602 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
POLR1AO95602 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
POLR1AO95602 AL365181.1-201ENST00000564032 1828 ntBASIC20.52■□□□□ 0.87
POLR1AO95602 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
POLR1AO95602 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
POLR1AO95602 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
POLR1AO95602 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1AO95602 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1AO95602 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1AO95602 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC20.51■□□□□ 0.87
POLR1AO95602 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1AO95602 GSN-209ENST00000449733 2702 ntTSL 2 BASIC20.51■□□□□ 0.87
POLR1AO95602 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1AO95602 OR10N1P-201ENST00000392758 869 ntBASIC20.51■□□□□ 0.87
POLR1AO95602 LINC00265-2P-201ENST00000413372 782 ntBASIC20.51■□□□□ 0.87
POLR1AO95602 AC104961.1-201ENST00000427605 771 ntBASIC20.51■□□□□ 0.87
POLR1AO95602 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC20.51■□□□□ 0.87
POLR1AO95602 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC20.51■□□□□ 0.87
POLR1AO95602 NDUFB10P1-201ENST00000567319 521 ntBASIC20.51■□□□□ 0.87
POLR1AO95602 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC20.51■□□□□ 0.87
POLR1AO95602 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC20.51■□□□□ 0.87
POLR1AO95602 PRMT1P1-201ENST00000604252 1009 ntBASIC20.51■□□□□ 0.87
POLR1AO95602 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC20.51■□□□□ 0.87
POLR1AO95602 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1AO95602 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC20.51■□□□□ 0.87
POLR1AO95602 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1AO95602 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1AO95602 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1AO95602 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC20.51■□□□□ 0.87
POLR1AO95602 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
POLR1AO95602 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1AO95602 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1AO95602 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1AO95602 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1AO95602 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC20.5■□□□□ 0.87
POLR1AO95602 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1AO95602 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1AO95602 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC20.5■□□□□ 0.87
POLR1AO95602 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC20.5■□□□□ 0.87
POLR1AO95602 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC20.5■□□□□ 0.87
POLR1AO95602 HNRNPA1P16-201ENST00000575692 955 ntBASIC20.5■□□□□ 0.87
POLR1AO95602 AP005264.5-201ENST00000590066 467 ntBASIC20.5■□□□□ 0.87
POLR1AO95602 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC20.5■□□□□ 0.87
POLR1AO95602 AL591471.1-201ENST00000621855 229 ntBASIC20.5■□□□□ 0.87
POLR1AO95602 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1AO95602 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
POLR1AO95602 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1AO95602 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1AO95602 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC20.5■□□□□ 0.87
POLR1AO95602 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC20.5■□□□□ 0.87
POLR1AO95602 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
POLR1AO95602 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1AO95602 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
POLR1AO95602 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC20.5■□□□□ 0.87
POLR1AO95602 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1AO95602 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1AO95602 AL121949.3-201ENST00000406684 385 ntBASIC20.5■□□□□ 0.87
POLR1AO95602 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC20.5■□□□□ 0.87
POLR1AO95602 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1AO95602 DLK1-205ENST00000556051 469 ntTSL 2 BASIC20.5■□□□□ 0.87
POLR1AO95602 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC20.5■□□□□ 0.87
POLR1AO95602 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC20.5■□□□□ 0.87
POLR1AO95602 AC067931.2-201ENST00000623655 2003 ntBASIC20.5■□□□□ 0.87
POLR1AO95602 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR1AO95602 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 236.9 ms