Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
SCN2BO60939 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.82□□□□□ -0.2
SCN2BO60939 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.82□□□□□ -0.2
SCN2BO60939 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SCN2BO60939 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SCN2BO60939 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.82□□□□□ -0.2
SCN2BO60939 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SCN2BO60939 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 AC005229.1-201ENST00000392885 409 ntBASIC13.82□□□□□ -0.2
SCN2BO60939 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.82□□□□□ -0.2
SCN2BO60939 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SCN2BO60939 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.82□□□□□ -0.2
SCN2BO60939 RNA5SP486-201ENST00000515961 83 ntBASIC13.82□□□□□ -0.2
SCN2BO60939 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.82□□□□□ -0.2
SCN2BO60939 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SCN2BO60939 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.82□□□□□ -0.2
SCN2BO60939 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
SCN2BO60939 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SCN2BO60939 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.82□□□□□ -0.2
SCN2BO60939 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
SCN2BO60939 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.82□□□□□ -0.2
SCN2BO60939 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
SCN2BO60939 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN2BO60939 AC005252.3-201ENST00000623855 2258 ntBASIC13.81□□□□□ -0.2
SCN2BO60939 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SCN2BO60939 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SCN2BO60939 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.81□□□□□ -0.2
SCN2BO60939 AC009093.10-201ENST00000641956 1442 ntBASIC13.81□□□□□ -0.2
SCN2BO60939 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.81□□□□□ -0.2
SCN2BO60939 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SCN2BO60939 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.81□□□□□ -0.2
SCN2BO60939 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.81□□□□□ -0.2
SCN2BO60939 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
SCN2BO60939 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.81□□□□□ -0.2
SCN2BO60939 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SCN2BO60939 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SCN2BO60939 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.81□□□□□ -0.2
SCN2BO60939 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SCN2BO60939 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.81□□□□□ -0.2
SCN2BO60939 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.81□□□□□ -0.2
SCN2BO60939 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.81□□□□□ -0.2
SCN2BO60939 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.81□□□□□ -0.2
SCN2BO60939 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.81□□□□□ -0.2
SCN2BO60939 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.81□□□□□ -0.2
SCN2BO60939 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.81□□□□□ -0.2
SCN2BO60939 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.81□□□□□ -0.2
SCN2BO60939 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.81□□□□□ -0.2
SCN2BO60939 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.81□□□□□ -0.2
SCN2BO60939 MIR4683-201ENST00000579659 81 ntBASIC13.81□□□□□ -0.2
SCN2BO60939 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.81□□□□□ -0.2
SCN2BO60939 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.81□□□□□ -0.2
SCN2BO60939 AC002472.3-201ENST00000640124 621 ntBASIC13.81□□□□□ -0.2
SCN2BO60939 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.81□□□□□ -0.2
SCN2BO60939 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.81□□□□□ -0.2
SCN2BO60939 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.81□□□□□ -0.2
SCN2BO60939 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms