Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 HIRIP3-201ENST00000279392 3388 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 PRAMEF27-201ENST00000436041 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 GOLGA8EP-201ENST00000530246 1959 ntBASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 MIPEPP3-201ENST00000412105 444 ntBASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 AC097658.1-201ENST00000475555 843 ntBASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 AC005412.3-201ENST00000580309 715 ntBASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 AL353135.1-201ENST00000606729 504 ntBASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 AL031432.3-201ENST00000607698 485 ntBASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 BAP1-211ENST00000615113 489 ntBASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 LINC01159-201ENST00000433433 3103 ntTSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 TLE4-201ENST00000265284 2382 ntTSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 FBLN5-201ENST00000267620 2423 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 IRAK2-201ENST00000256458 3483 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 NSUN5P2-203ENST00000457352 1529 ntBASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 TMEM8B-201ENST00000377988 3731 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 AC009533.1-201ENST00000539757 3158 ntBASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 WDR37-201ENST00000263150 4462 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 PMEPA1-203ENST00000347215 4546 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 PMEPA1-205ENST00000395816 4519 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 ATP8B2-202ENST00000368489 5861 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 SPRY2-202ENST00000377104 2111 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 FOSB-204ENST00000585836 3550 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 PPP1R26P2-201ENST00000611403 3595 ntBASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 TTC8-205ENST00000358622 2297 ntTSL 5 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 AGK-201ENST00000355413 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 CDHR4-202ENST00000412678 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 MAB21L2-201ENST00000317605 2772 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 POLN-201ENST00000382865 2899 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms