Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHB1Q9Y5F3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHB1Q9Y5F3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
PCDHB1Q9Y5F3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHB1Q9Y5F3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.58□□□□□ -0.07
PCDHB1Q9Y5F3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.58□□□□□ -0.07
PCDHB1Q9Y5F3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHB1Q9Y5F3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHB1Q9Y5F3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 AL136379.1-201ENST00000623471 2642 ntBASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 Z97180.1-201ENST00000445173 988 ntBASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 LDHBP1-201ENST00000455730 1119 ntBASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 AC134698.3-201ENST00000523880 214 ntBASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 SORD2P-201ENST00000558556 1069 ntBASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 MIR4683-201ENST00000579659 81 ntBASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 AC009093.10-201ENST00000641956 1442 ntBASIC14.58□□□□□ -0.08
PCDHB1Q9Y5F3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 AC006504.5-208ENST00000588784 2401 ntBASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 RN7SL774P-201ENST00000577467 290 ntBASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 TUBBP5-203ENST00000508529 1334 ntBASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 AC027601.5-201ENST00000624065 2482 ntBASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHB1Q9Y5F3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms