Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 AC015818.8-201ENST00000587907 1519 ntBASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 AC009093.2-202ENST00000620513 2079 ntBASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 DFFBP1-201ENST00000433250 979 ntBASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 AC093433.1-201ENST00000458048 571 ntBASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 SERBP1P5-201ENST00000510079 1181 ntBASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 AC019294.4-201ENST00000561777 2905 ntBASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 AC073548.1-201ENST00000624088 1882 ntBASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HDHD3Q9BSH5 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 AC007541.1-201ENST00000570282 1469 ntBASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 ELK1P1-201ENST00000485699 580 ntBASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 AL391280.1-201ENST00000506969 1062 ntBASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms