Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 ACKR1-201ENST00000368121 1240 ntBASIC12.78□□□□□ -0.36
CPNE2Q96FN4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.78□□□□□ -0.36
CPNE2Q96FN4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 AC026434.2-201ENST00000506094 1078 ntBASIC12.78□□□□□ -0.36
CPNE2Q96FN4 AC093214.1-201ENST00000511688 1107 ntBASIC12.78□□□□□ -0.36
CPNE2Q96FN4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 AC124283.3-201ENST00000570869 594 ntBASIC12.78□□□□□ -0.36
CPNE2Q96FN4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 AC023511.2-201ENST00000618803 211 ntBASIC12.78□□□□□ -0.36
CPNE2Q96FN4 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 INE2-201ENST00000630399 1874 ntBASIC12.78□□□□□ -0.36
CPNE2Q96FN4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 AC019294.4-201ENST00000561777 2905 ntBASIC12.78□□□□□ -0.36
CPNE2Q96FN4 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPNE2Q96FN4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CPNE2Q96FN4 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CPNE2Q96FN4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.77□□□□□ -0.36
CPNE2Q96FN4 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CPNE2Q96FN4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CPNE2Q96FN4 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CPNE2Q96FN4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CPNE2Q96FN4 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CPNE2Q96FN4 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CPNE2Q96FN4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.77□□□□□ -0.36
CPNE2Q96FN4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 AL162726.2-201ENST00000438986 1017 ntBASIC12.77□□□□□ -0.37
CPNE2Q96FN4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 AC093512.1-201ENST00000617969 520 ntBASIC12.77□□□□□ -0.37
CPNE2Q96FN4 AC008761.3-201ENST00000624803 892 ntBASIC12.77□□□□□ -0.37
CPNE2Q96FN4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.77□□□□□ -0.37
CPNE2Q96FN4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 AC003102.2-201ENST00000589195 1469 ntBASIC12.77□□□□□ -0.37
CPNE2Q96FN4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CPNE2Q96FN4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms