Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.42■□□□□ 0.06
ATP2A3Q93084 FAM58BP-201ENST00000439056 645 ntBASIC15.42■□□□□ 0.06
ATP2A3Q93084 AL133466.1-201ENST00000447582 150 ntBASIC15.42■□□□□ 0.06
ATP2A3Q93084 RNMTL1P1-201ENST00000454103 560 ntBASIC15.42■□□□□ 0.06
ATP2A3Q93084 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 AC022217.1-201ENST00000521069 738 ntBASIC15.42■□□□□ 0.06
ATP2A3Q93084 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATP2A3Q93084 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 AP001505.2-201ENST00000616815 443 ntBASIC15.42■□□□□ 0.06
ATP2A3Q93084 CU633904.3-201ENST00000624042 1029 ntBASIC15.42■□□□□ 0.06
ATP2A3Q93084 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATP2A3Q93084 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 SHC1P1-201ENST00000425230 1745 ntBASIC15.42■□□□□ 0.06
ATP2A3Q93084 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATP2A3Q93084 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATP2A3Q93084 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 AC011840.2-201ENST00000563063 1520 ntBASIC15.42■□□□□ 0.06
ATP2A3Q93084 PEG13-201ENST00000631594 5667 ntBASIC15.42■□□□□ 0.06
ATP2A3Q93084 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATP2A3Q93084 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.42■□□□□ 0.06
ATP2A3Q93084 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATP2A3Q93084 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 Z97180.1-201ENST00000445173 988 ntBASIC15.41■□□□□ 0.06
ATP2A3Q93084 SPTLC1P5-201ENST00000450718 252 ntBASIC15.41■□□□□ 0.06
ATP2A3Q93084 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.41■□□□□ 0.06
ATP2A3Q93084 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 AL136295.7-201ENST00000619226 1200 ntBASIC15.41■□□□□ 0.06
ATP2A3Q93084 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 AC091812.3-201ENST00000621362 345 ntBASIC15.41■□□□□ 0.06
ATP2A3Q93084 AL162426.1-201ENST00000624141 743 ntBASIC15.41■□□□□ 0.06
ATP2A3Q93084 AC004923.1-202ENST00000642106 209 ntBASIC15.41■□□□□ 0.06
ATP2A3Q93084 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.41■□□□□ 0.06
ATP2A3Q93084 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 TUBBP5-203ENST00000508529 1334 ntBASIC15.41■□□□□ 0.06
ATP2A3Q93084 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ATP2A3Q93084 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP2A3Q93084 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP2A3Q93084 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
ATP2A3Q93084 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms