Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
CCDC83Q8IWF9 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC17.14■□□□□ 0.34
CCDC83Q8IWF9 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 COX5BP1-201ENST00000507622 393 ntBASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 AP005018.1-201ENST00000525475 301 ntBASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 AL358472.3-201ENST00000608147 415 ntBASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 AL022328.1-201ENST00000610050 478 ntBASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 IGHV3-72-202ENST00000621503 303 ntBASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 AL022313.4-201ENST00000562756 2046 ntBASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 AC064801.2-201ENST00000625052 1303 ntBASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC83Q8IWF9 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 AL512384.1-201ENST00000406683 331 ntBASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 CD8B2-202ENST00000417670 633 ntBASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 AC016694.1-201ENST00000434179 700 ntBASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 AL161932.2-201ENST00000435436 679 ntBASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 AC006453.4-201ENST00000636949 1252 ntBASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 CICP17-201ENST00000418553 2377 ntBASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC83Q8IWF9 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms