Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 AC084364.1-201ENST00000551967 1556 ntBASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 RARRES2P5-201ENST00000564013 466 ntBASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 MIR4525-201ENST00000580000 75 ntBASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 AC015936.2-201ENST00000593177 259 ntBASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 AL031719.1-201ENST00000623365 2587 ntBASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 AC018665.1-201ENST00000622927 1362 ntBASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 FAM8A2P-201ENST00000528813 1142 ntBASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 RRP7BP-205ENST00000566851 833 ntBASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 AC092337.1-201ENST00000568699 1129 ntBASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.29■□□□□ 0.04
FOXR1Q6PIV2 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 FTO-214ENST00000636218 2227 ntTSL 5 BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 RPL5P21-201ENST00000404620 815 ntBASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 GHSR-202ENST00000427970 912 ntBASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 MIR4538-201ENST00000581377 78 ntBASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 BTNL10-201ENST00000595971 695 ntBASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 AGAP10P-201ENST00000454844 2418 ntBASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 AP001972.5-201ENST00000624624 2338 ntBASIC15.28■□□□□ 0.04
FOXR1Q6PIV2 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms