Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.19□□□□□ -0.14
YBX1P67809 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
YBX1P67809 KHSRPP1-201ENST00000427983 1768 ntBASIC14.19□□□□□ -0.14
YBX1P67809 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
YBX1P67809 RN7SL832P-201ENST00000607781 1756 ntBASIC14.19□□□□□ -0.14
YBX1P67809 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.19□□□□□ -0.14
YBX1P67809 AC020910.6-201ENST00000623084 1459 ntBASIC14.19□□□□□ -0.14
YBX1P67809 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
YBX1P67809 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 AC011498.7-201ENST00000624986 2027 ntBASIC14.19□□□□□ -0.14
YBX1P67809 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
YBX1P67809 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
YBX1P67809 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
YBX1P67809 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 FAM86MP-201ENST00000340703 885 ntBASIC14.19□□□□□ -0.14
YBX1P67809 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.19□□□□□ -0.14
YBX1P67809 AC079178.1-201ENST00000420915 656 ntBASIC14.19□□□□□ -0.14
YBX1P67809 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
YBX1P67809 AL591846.1-201ENST00000451736 433 ntBASIC14.19□□□□□ -0.14
YBX1P67809 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.19□□□□□ -0.14
YBX1P67809 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.19□□□□□ -0.14
YBX1P67809 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.19□□□□□ -0.14
YBX1P67809 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.19□□□□□ -0.14
YBX1P67809 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.19□□□□□ -0.14
YBX1P67809 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.19□□□□□ -0.14
YBX1P67809 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.19□□□□□ -0.14
YBX1P67809 AC005695.3-201ENST00000614522 232 ntBASIC14.19□□□□□ -0.14
YBX1P67809 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.19□□□□□ -0.14
YBX1P67809 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.19□□□□□ -0.14
YBX1P67809 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 AC244394.1-201ENST00000435000 1665 ntBASIC14.19□□□□□ -0.14
YBX1P67809 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.19□□□□□ -0.14
YBX1P67809 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.19□□□□□ -0.14
YBX1P67809 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
YBX1P67809 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.18□□□□□ -0.14
YBX1P67809 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
YBX1P67809 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
YBX1P67809 AC019294.4-201ENST00000561777 2905 ntBASIC14.18□□□□□ -0.14
YBX1P67809 MYADML-201ENST00000474610 2147 ntBASIC14.18□□□□□ -0.14
YBX1P67809 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.18□□□□□ -0.14
YBX1P67809 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
YBX1P67809 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.18□□□□□ -0.14
YBX1P67809 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
YBX1P67809 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.18□□□□□ -0.14
YBX1P67809 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
YBX1P67809 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.18□□□□□ -0.14
YBX1P67809 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
YBX1P67809 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.18□□□□□ -0.14
YBX1P67809 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.18□□□□□ -0.14
YBX1P67809 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.18□□□□□ -0.14
YBX1P67809 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.18□□□□□ -0.14
YBX1P67809 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.18□□□□□ -0.14
YBX1P67809 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.18□□□□□ -0.14
YBX1P67809 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.18□□□□□ -0.14
YBX1P67809 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.18□□□□□ -0.14
YBX1P67809 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
YBX1P67809 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
YBX1P67809 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.18□□□□□ -0.14
YBX1P67809 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.18□□□□□ -0.14
YBX1P67809 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.18□□□□□ -0.14
YBX1P67809 DUX4L46-201ENST00000566845 751 ntBASIC14.18□□□□□ -0.14
YBX1P67809 AC027601.3-201ENST00000622907 509 ntBASIC14.18□□□□□ -0.14
YBX1P67809 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
YBX1P67809 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.18□□□□□ -0.14
YBX1P67809 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YBX1P67809 KRT8P28-201ENST00000433288 1390 ntBASIC14.18□□□□□ -0.14
YBX1P67809 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.18□□□□□ -0.14
YBX1P67809 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms