Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
FOXG1P55316 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.73□□□□□ -0.37
FOXG1P55316 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.73□□□□□ -0.37
FOXG1P55316 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
FOXG1P55316 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.73□□□□□ -0.37
FOXG1P55316 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.73□□□□□ -0.37
FOXG1P55316 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
FOXG1P55316 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
FOXG1P55316 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
FOXG1P55316 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.73□□□□□ -0.37
FOXG1P55316 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.73□□□□□ -0.37
FOXG1P55316 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
FOXG1P55316 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.73□□□□□ -0.37
FOXG1P55316 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
FOXG1P55316 RN7SKP214-201ENST00000364208 315 ntBASIC12.73□□□□□ -0.37
FOXG1P55316 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.73□□□□□ -0.37
FOXG1P55316 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
FOXG1P55316 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.73□□□□□ -0.37
FOXG1P55316 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.73□□□□□ -0.37
FOXG1P55316 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.73□□□□□ -0.37
FOXG1P55316 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
FOXG1P55316 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
FOXG1P55316 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.73□□□□□ -0.37
FOXG1P55316 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.73□□□□□ -0.37
FOXG1P55316 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
FOXG1P55316 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.73□□□□□ -0.37
FOXG1P55316 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
FOXG1P55316 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.73□□□□□ -0.37
FOXG1P55316 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
FOXG1P55316 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.73□□□□□ -0.37
FOXG1P55316 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
FOXG1P55316 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.73□□□□□ -0.37
FOXG1P55316 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.73□□□□□ -0.37
FOXG1P55316 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
FOXG1P55316 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
FOXG1P55316 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXG1P55316 AL133338.1-201ENST00000565695 1517 ntBASIC12.72□□□□□ -0.37
FOXG1P55316 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.72□□□□□ -0.37
FOXG1P55316 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.72□□□□□ -0.37
FOXG1P55316 AC008132.1-202ENST00000342005 1389 ntBASIC12.72□□□□□ -0.37
FOXG1P55316 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.72□□□□□ -0.37
FOXG1P55316 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.72□□□□□ -0.37
FOXG1P55316 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
FOXG1P55316 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.72□□□□□ -0.37
FOXG1P55316 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 BCYRN1-201ENST00000418539 200 ntBASIC12.72□□□□□ -0.37
FOXG1P55316 AC011742.3-201ENST00000439053 820 ntBASIC12.72□□□□□ -0.37
FOXG1P55316 RN7SL11P-201ENST00000471305 293 ntBASIC12.72□□□□□ -0.37
FOXG1P55316 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
FOXG1P55316 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.72□□□□□ -0.37
FOXG1P55316 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.72□□□□□ -0.37
FOXG1P55316 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.72□□□□□ -0.37
FOXG1P55316 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.72□□□□□ -0.37
FOXG1P55316 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
FOXG1P55316 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
FOXG1P55316 AC091544.8-201ENST00000619490 361 ntBASIC12.72□□□□□ -0.37
FOXG1P55316 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.72□□□□□ -0.37
FOXG1P55316 AL157791.1-201ENST00000553667 1699 ntBASIC12.72□□□□□ -0.37
FOXG1P55316 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms