Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AGAP10P-201ENST00000454844 2418 ntBASIC14.31□□□□□ -0.12
CDH13P55290 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH13P55290 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH13P55290 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH13P55290 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDH13P55290 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH13P55290 LINC02486-201ENST00000604157 3000 ntBASIC14.31□□□□□ -0.12
CDH13P55290 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH13P55290 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDH13P55290 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CDH13P55290 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDH13P55290 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 TPM3P8-201ENST00000330554 643 ntBASIC14.3□□□□□ -0.12
CDH13P55290 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CDH13P55290 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH13P55290 TMEM198B-204ENST00000484016 896 ntBASIC14.3□□□□□ -0.12
CDH13P55290 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.3□□□□□ -0.12
CDH13P55290 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH13P55290 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.3□□□□□ -0.12
CDH13P55290 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH13P55290 ECM1P1-201ENST00000604092 1279 ntBASIC14.3□□□□□ -0.12
CDH13P55290 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH13P55290 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CDH13P55290 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH13P55290 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CDH13P55290 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDH13P55290 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH13P55290 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CDH13P55290 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CDH13P55290 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH13P55290 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH13P55290 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH13P55290 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDH13P55290 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CDH13P55290 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDH13P55290 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
CDH13P55290 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH13P55290 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.29□□□□□ -0.12
CDH13P55290 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH13P55290 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH13P55290 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH13P55290 TERF1P3-201ENST00000505638 1227 ntBASIC14.29□□□□□ -0.12
CDH13P55290 ALG3P1-201ENST00000508806 1114 ntBASIC14.29□□□□□ -0.12
CDH13P55290 AP001889.1-201ENST00000525414 633 ntBASIC14.29□□□□□ -0.12
CDH13P55290 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDH13P55290 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH13P55290 AC106820.3-201ENST00000561653 397 ntBASIC14.29□□□□□ -0.12
CDH13P55290 GNRHR2-203ENST00000581100 1187 ntBASIC14.29□□□□□ -0.12
CDH13P55290 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CDH13P55290 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.29□□□□□ -0.12
CDH13P55290 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDH13P55290 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDH13P55290 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDH13P55290 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 AC005252.3-201ENST00000623855 2258 ntBASIC14.29□□□□□ -0.12
CDH13P55290 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH13P55290 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms