Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A1P43005 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.26■□□□□ 0.03
SLC1A1P43005 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SLC1A1P43005 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC1A1P43005 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A1P43005 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A1P43005 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A1P43005 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SLC1A1P43005 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC1A1P43005 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC1A1P43005 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC1A1P43005 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A1P43005 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC1A1P43005 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
SLC1A1P43005 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC1A1P43005 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC1A1P43005 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC1A1P43005 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC1A1P43005 AL355994.2-201ENST00000447882 704 ntBASIC15.25■□□□□ 0.03
SLC1A1P43005 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A1P43005 AC007551.1-201ENST00000457394 519 ntBASIC15.25■□□□□ 0.03
SLC1A1P43005 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC1A1P43005 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SLC1A1P43005 KRT90P-201ENST00000549264 1064 ntBASIC15.25■□□□□ 0.03
SLC1A1P43005 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.25■□□□□ 0.03
SLC1A1P43005 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC1A1P43005 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A1P43005 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SLC1A1P43005 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC1A1P43005 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A1P43005 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC1A1P43005 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC1A1P43005 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 AC111170.3-201ENST00000624282 2464 ntBASIC15.25■□□□□ 0.03
SLC1A1P43005 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC1A1P43005 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC1A1P43005 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A1P43005 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SLC1A1P43005 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A1P43005 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
SLC1A1P43005 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLC1A1P43005 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
SLC1A1P43005 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A1P43005 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC1A1P43005 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A1P43005 AL512384.1-201ENST00000406683 331 ntBASIC15.24■□□□□ 0.03
SLC1A1P43005 TTTY23B-201ENST00000442790 549 ntBASIC15.24■□□□□ 0.03
SLC1A1P43005 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC1A1P43005 AC244669.2-201ENST00000612320 853 ntBASIC15.24■□□□□ 0.03
SLC1A1P43005 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC1A1P43005 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLC1A1P43005 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A1P43005 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A1P43005 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC1A1P43005 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms