Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HTR1EP28566 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
HTR1EP28566 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.03□□□□□ -0.16
HTR1EP28566 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.03□□□□□ -0.16
HTR1EP28566 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HTR1EP28566 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HTR1EP28566 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HTR1EP28566 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HTR1EP28566 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HTR1EP28566 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.02□□□□□ -0.16
HTR1EP28566 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HTR1EP28566 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.02□□□□□ -0.16
HTR1EP28566 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HTR1EP28566 AC015909.5-201ENST00000624336 2266 ntBASIC14.02□□□□□ -0.16
HTR1EP28566 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HTR1EP28566 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HTR1EP28566 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.02□□□□□ -0.16
HTR1EP28566 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.02□□□□□ -0.16
HTR1EP28566 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HTR1EP28566 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
HTR1EP28566 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HTR1EP28566 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HTR1EP28566 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.02□□□□□ -0.16
HTR1EP28566 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.02□□□□□ -0.16
HTR1EP28566 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HTR1EP28566 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
HTR1EP28566 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
HTR1EP28566 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 AC005229.1-201ENST00000392885 409 ntBASIC14.02□□□□□ -0.17
HTR1EP28566 AC092506.1-202ENST00000401022 528 ntBASIC14.02□□□□□ -0.17
HTR1EP28566 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.02□□□□□ -0.17
HTR1EP28566 GOLGA2P4-201ENST00000441462 777 ntBASIC14.02□□□□□ -0.17
HTR1EP28566 AL355864.2-201ENST00000447420 863 ntBASIC14.02□□□□□ -0.17
HTR1EP28566 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.02□□□□□ -0.17
HTR1EP28566 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
HTR1EP28566 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.02□□□□□ -0.17
HTR1EP28566 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.02□□□□□ -0.17
HTR1EP28566 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.02□□□□□ -0.17
HTR1EP28566 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.02□□□□□ -0.17
HTR1EP28566 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.02□□□□□ -0.17
HTR1EP28566 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 AC010328.2-201ENST00000597698 1111 ntBASIC14.02□□□□□ -0.17
HTR1EP28566 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
HTR1EP28566 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.02□□□□□ -0.17
HTR1EP28566 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.02□□□□□ -0.17
HTR1EP28566 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
HTR1EP28566 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
HTR1EP28566 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
HTR1EP28566 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.02□□□□□ -0.17
HTR1EP28566 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 AC011498.7-201ENST00000624986 2027 ntBASIC14.02□□□□□ -0.17
HTR1EP28566 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
HTR1EP28566 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HTR1EP28566 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1EP28566 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.01□□□□□ -0.17
HTR1EP28566 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.01□□□□□ -0.17
HTR1EP28566 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HTR1EP28566 SALL4P5-201ENST00000419001 1760 ntBASIC14.01□□□□□ -0.17
HTR1EP28566 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1EP28566 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1EP28566 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HTR1EP28566 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1EP28566 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.01□□□□□ -0.17
HTR1EP28566 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1EP28566 AC111170.3-201ENST00000624282 2464 ntBASIC14.01□□□□□ -0.17
HTR1EP28566 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1EP28566 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1EP28566 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HTR1EP28566 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1EP28566 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HTR1EP28566 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1EP28566 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HTR1EP28566 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1EP28566 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1EP28566 AL136172.1-201ENST00000598590 1394 ntBASIC14.01□□□□□ -0.17
HTR1EP28566 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1EP28566 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1EP28566 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1EP28566 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1EP28566 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1EP28566 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.01□□□□□ -0.17
HTR1EP28566 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HTR1EP28566 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms