Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CXCL3P19876 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CXCL3P19876 AC004066.1-201ENST00000502488 802 ntBASIC12.24□□□□□ -0.45
CXCL3P19876 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.24□□□□□ -0.45
CXCL3P19876 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CXCL3P19876 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.24□□□□□ -0.45
CXCL3P19876 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.24□□□□□ -0.45
CXCL3P19876 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.24□□□□□ -0.45
CXCL3P19876 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CXCL3P19876 BCAR1-209ENST00000546196 1340 ntBASIC12.24□□□□□ -0.45
CXCL3P19876 KRT126P-201ENST00000549467 1181 ntBASIC12.24□□□□□ -0.45
CXCL3P19876 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.24□□□□□ -0.45
CXCL3P19876 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.24□□□□□ -0.45
CXCL3P19876 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.24□□□□□ -0.45
CXCL3P19876 KRT18P8-201ENST00000581937 1246 ntBASIC12.24□□□□□ -0.45
CXCL3P19876 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.24□□□□□ -0.45
CXCL3P19876 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
CXCL3P19876 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
CXCL3P19876 AC124319.4-201ENST00000622931 2161 ntBASIC12.24□□□□□ -0.45
CXCL3P19876 AC004877.2-201ENST00000623941 599 ntBASIC12.24□□□□□ -0.45
CXCL3P19876 AC018445.4-201ENST00000624066 2291 ntBASIC12.24□□□□□ -0.45
CXCL3P19876 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CXCL3P19876 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CXCL3P19876 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
CXCL3P19876 AC022364.1-202ENST00000617468 2409 ntBASIC12.23□□□□□ -0.45
CXCL3P19876 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CXCL3P19876 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CXCL3P19876 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CXCL3P19876 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.23□□□□□ -0.45
CXCL3P19876 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.23□□□□□ -0.45
CXCL3P19876 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CXCL3P19876 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CXCL3P19876 AL136172.1-201ENST00000598590 1394 ntBASIC12.23□□□□□ -0.45
CXCL3P19876 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 HLA-A-201ENST00000376802 1334 ntBASIC12.23□□□□□ -0.45
CXCL3P19876 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.23□□□□□ -0.45
CXCL3P19876 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 AC003958.1-201ENST00000435883 421 ntBASIC12.23□□□□□ -0.45
CXCL3P19876 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.23□□□□□ -0.45
CXCL3P19876 KRT18P43-201ENST00000469825 1281 ntBASIC12.23□□□□□ -0.45
CXCL3P19876 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.23□□□□□ -0.45
CXCL3P19876 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.23□□□□□ -0.45
CXCL3P19876 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.23□□□□□ -0.45
CXCL3P19876 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.23□□□□□ -0.45
CXCL3P19876 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.23□□□□□ -0.45
CXCL3P19876 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.23□□□□□ -0.45
CXCL3P19876 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.23□□□□□ -0.45
CXCL3P19876 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.23□□□□□ -0.45
CXCL3P19876 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 BAP1-211ENST00000615113 489 ntBASIC12.23□□□□□ -0.45
CXCL3P19876 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
CXCL3P19876 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
CXCL3P19876 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.23□□□□□ -0.45
CXCL3P19876 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.23□□□□□ -0.45
CXCL3P19876 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.23□□□□□ -0.45
CXCL3P19876 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CXCL3P19876 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CXCL3P19876 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms