Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.7□□□□□ -0.38
CSF1P09603 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.7□□□□□ -0.38
CSF1P09603 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.7□□□□□ -0.38
CSF1P09603 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.7□□□□□ -0.38
CSF1P09603 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
CSF1P09603 ARSEP1-201ENST00000420443 635 ntBASIC12.7□□□□□ -0.38
CSF1P09603 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.7□□□□□ -0.38
CSF1P09603 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.7□□□□□ -0.38
CSF1P09603 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.7□□□□□ -0.38
CSF1P09603 AC011495.1-201ENST00000498085 584 ntBASIC12.7□□□□□ -0.38
CSF1P09603 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.7□□□□□ -0.38
CSF1P09603 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.7□□□□□ -0.38
CSF1P09603 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.7□□□□□ -0.38
CSF1P09603 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.7□□□□□ -0.38
CSF1P09603 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
CSF1P09603 AC008738.7-201ENST00000609744 511 ntBASIC12.7□□□□□ -0.38
CSF1P09603 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.7□□□□□ -0.38
CSF1P09603 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.7□□□□□ -0.38
CSF1P09603 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.7□□□□□ -0.38
CSF1P09603 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.7□□□□□ -0.38
CSF1P09603 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.7□□□□□ -0.38
CSF1P09603 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.7□□□□□ -0.38
CSF1P09603 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.7□□□□□ -0.38
CSF1P09603 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.7□□□□□ -0.38
CSF1P09603 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
CSF1P09603 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.7□□□□□ -0.38
CSF1P09603 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CSF1P09603 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.7□□□□□ -0.38
CSF1P09603 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSF1P09603 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.69□□□□□ -0.38
CSF1P09603 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.69□□□□□ -0.38
CSF1P09603 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CSF1P09603 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CSF1P09603 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 AC083964.2-201ENST00000623988 2396 ntBASIC12.69□□□□□ -0.38
CSF1P09603 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
CSF1P09603 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CSF1P09603 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CSF1P09603 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 TOMM22P5-201ENST00000416399 439 ntBASIC12.69□□□□□ -0.38
CSF1P09603 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.69□□□□□ -0.38
CSF1P09603 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 RN7SL752P-201ENST00000463779 287 ntBASIC12.69□□□□□ -0.38
CSF1P09603 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.69□□□□□ -0.38
CSF1P09603 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.69□□□□□ -0.38
CSF1P09603 GIMAP3P-201ENST00000495150 836 ntBASIC12.69□□□□□ -0.38
CSF1P09603 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CSF1P09603 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.69□□□□□ -0.38
CSF1P09603 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.69□□□□□ -0.38
CSF1P09603 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.69□□□□□ -0.38
CSF1P09603 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.69□□□□□ -0.38
CSF1P09603 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.69□□□□□ -0.38
CSF1P09603 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.69□□□□□ -0.38
CSF1P09603 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CSF1P09603 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CSF1P09603 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.69□□□□□ -0.38
CSF1P09603 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.69□□□□□ -0.38
CSF1P09603 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSF1P09603 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms