Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 AC055811.4-201ENST00000624039 1754 ntBASIC12.79□□□□□ -0.36
SFTPBP07988 KRT8P22-201ENST00000562317 1415 ntBASIC12.79□□□□□ -0.36
SFTPBP07988 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SFTPBP07988 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.78□□□□□ -0.36
SFTPBP07988 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SFTPBP07988 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SFTPBP07988 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SFTPBP07988 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SFTPBP07988 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SFTPBP07988 RNU1-114P-201ENST00000365297 166 ntBASIC12.78□□□□□ -0.36
SFTPBP07988 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.78□□□□□ -0.36
SFTPBP07988 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.78□□□□□ -0.36
SFTPBP07988 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.78□□□□□ -0.36
SFTPBP07988 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.78□□□□□ -0.36
SFTPBP07988 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 AC007389.4-201ENST00000454674 793 ntBASIC12.78□□□□□ -0.36
SFTPBP07988 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.78□□□□□ -0.36
SFTPBP07988 TPT1P11-201ENST00000458482 498 ntBASIC12.78□□□□□ -0.36
SFTPBP07988 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.78□□□□□ -0.36
SFTPBP07988 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.78□□□□□ -0.36
SFTPBP07988 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.78□□□□□ -0.36
SFTPBP07988 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.78□□□□□ -0.36
SFTPBP07988 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.78□□□□□ -0.36
SFTPBP07988 AC124283.3-201ENST00000570869 594 ntBASIC12.78□□□□□ -0.36
SFTPBP07988 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.78□□□□□ -0.36
SFTPBP07988 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.78□□□□□ -0.36
SFTPBP07988 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.78□□□□□ -0.36
SFTPBP07988 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.78□□□□□ -0.36
SFTPBP07988 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
SFTPBP07988 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SFTPBP07988 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.78□□□□□ -0.36
SFTPBP07988 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SFTPBP07988 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.78□□□□□ -0.36
SFTPBP07988 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.78□□□□□ -0.36
SFTPBP07988 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.78□□□□□ -0.36
SFTPBP07988 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SFTPBP07988 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.78□□□□□ -0.36
SFTPBP07988 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SFTPBP07988 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SFTPBP07988 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SFTPBP07988 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.78□□□□□ -0.36
SFTPBP07988 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.77□□□□□ -0.36
SFTPBP07988 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SFTPBP07988 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.77□□□□□ -0.36
SFTPBP07988 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SFTPBP07988 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SFTPBP07988 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SFTPBP07988 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SFTPBP07988 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SFTPBP07988 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.77□□□□□ -0.36
SFTPBP07988 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SFTPBP07988 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SFTPBP07988 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SFTPBP07988 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SFTPBP07988 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SFTPBP07988 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SFTPBP07988 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SFTPBP07988 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.77□□□□□ -0.36
SFTPBP07988 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SFTPBP07988 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SFTPBP07988 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SFTPBP07988 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
SFTPBP07988 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.77□□□□□ -0.37
SFTPBP07988 AL162726.2-201ENST00000438986 1017 ntBASIC12.77□□□□□ -0.37
SFTPBP07988 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.77□□□□□ -0.37
SFTPBP07988 GPR53P-205ENST00000457298 1084 ntBASIC12.77□□□□□ -0.37
SFTPBP07988 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SFTPBP07988 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.77□□□□□ -0.37
SFTPBP07988 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms