Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 AC026271.4-201ENST00000578214 1833 ntBASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 AL355306.1-201ENST00000415580 579 ntBASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 AKAP8P1-201ENST00000434743 1349 ntBASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 AC008620.2-201ENST00000510294 1569 ntBASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 PI4KAP2-201ENST00000360806 2080 ntBASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 GHET1-201ENST00000627071 1906 ntBASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 AC102953.2-201ENST00000609755 3026 ntBASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 AC003958.1-201ENST00000435883 421 ntBASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 RARRES2P8-201ENST00000566335 367 ntBASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 AC004835.2-201ENST00000603762 682 ntBASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 AC099522.2-201ENST00000607001 744 ntBASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 AL513210.1-201ENST00000629608 234 ntBASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 AL021155.1-201ENST00000438808 2637 ntBASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 TNRC18P1-201ENST00000502875 3650 ntBASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 AC018445.4-201ENST00000624066 2291 ntBASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRCH1Q9Y2L9 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 KRT8P35-201ENST00000483942 1338 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms