Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 BRD7P5-201ENST00000299197 1822 ntBASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 AC092127.1-201ENST00000567093 3455 ntBASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 BAX-205ENST00000391871 687 ntTSL 5 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 NRADDP-201ENST00000437305 691 ntBASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 GALP-202ENST00000440823 889 ntTSL 5 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 VENTXP3-201ENST00000546480 773 ntBASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 AC004801.1-201ENST00000549557 360 ntBASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 HNRNPA1P5-201ENST00000558213 966 ntBASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 AC023968.2-201ENST00000560593 1049 ntBASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 CES1P2-201ENST00000566467 1242 ntBASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 AC090386.2-201ENST00000623010 1039 ntBASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 AC110057.1-201ENST00000636031 898 ntBASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZC3H4Q9UPT8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 GRPEL2P1-201ENST00000453145 339 ntBASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 RN7SL128P-201ENST00000467883 305 ntBASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 DLK1-205ENST00000556051 469 ntTSL 2 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 AC140658.4-201ENST00000561990 352 ntBASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZC3H4Q9UPT8 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZC3H4Q9UPT8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms