Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 AC104073.2-201ENST00000453737 312 ntBASIC14.59□□□□□ -0.07
SPASTQ9UBP0 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 RN7SL774P-201ENST00000577467 290 ntBASIC14.59□□□□□ -0.07
SPASTQ9UBP0 AL645939.5-201ENST00000606834 243 ntBASIC14.59□□□□□ -0.07
SPASTQ9UBP0 AC026740.1-201ENST00000607068 791 ntBASIC14.59□□□□□ -0.07
SPASTQ9UBP0 AC091812.3-201ENST00000621362 345 ntBASIC14.59□□□□□ -0.07
SPASTQ9UBP0 AL805961.1-203ENST00000641078 1258 ntBASIC14.59□□□□□ -0.07
SPASTQ9UBP0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SPASTQ9UBP0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SPASTQ9UBP0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
SPASTQ9UBP0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
SPASTQ9UBP0 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SPASTQ9UBP0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.58□□□□□ -0.07
SPASTQ9UBP0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 AC012441.2-201ENST00000444843 739 ntBASIC14.58□□□□□ -0.08
SPASTQ9UBP0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 RN7SL769P-201ENST00000469386 295 ntBASIC14.58□□□□□ -0.08
SPASTQ9UBP0 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 MARK2P5-201ENST00000507649 634 ntBASIC14.58□□□□□ -0.08
SPASTQ9UBP0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 RNA5SP423-201ENST00000517127 109 ntBASIC14.58□□□□□ -0.08
SPASTQ9UBP0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 MIR4783-201ENST00000580343 82 ntBASIC14.58□□□□□ -0.08
SPASTQ9UBP0 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 AC090164.2-201ENST00000611487 516 ntBASIC14.58□□□□□ -0.08
SPASTQ9UBP0 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 AC068587.8-201ENST00000641239 219 ntBASIC14.58□□□□□ -0.08
SPASTQ9UBP0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPASTQ9UBP0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 SALL4P5-201ENST00000419001 1760 ntBASIC14.57□□□□□ -0.08
SPASTQ9UBP0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 AC003102.2-201ENST00000589195 1469 ntBASIC14.57□□□□□ -0.08
SPASTQ9UBP0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms